Gene Cphy_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1999 
Symbol 
ID5743027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2466257 
End bp2467246 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content38% 
IMG OID641293096 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001559106 
Protein GI160880138 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.724246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA ATCTTGTTGA GGTTGAAAAT CTGAAACAAT ATTTCTATGC CGGAGGGATT 
GGAAAGAAAG CGAAATATGT GAAAGCCGTG GATGATGTTA GTTTTTATAT CAGAAAGGGA
GAAACCTTAG GACTAGTTGG TGAATCTGGT TGTGGGAAAA CGACCACAGG ACGAAGTCTT
TTACGGTTAT ACGAACCAAC TGCCGGTCGT ATTATCTATA ATAATACGGT CATTTTCGAT
AAAGAGAAAA AGATAGCACT CGATATGATG CCATACCGAA AGAAAATGCA AGTTGTTTTT
CAAGATCCAT ATGCAAGTCT TAATCCGAGA ATGACGGTCG GAGAGATTAT AGGAGAGCCA
ATTGGAATTC ATCACTTAAT TCAGAATAAG AAAGACCGTC AAGATAGAAT TATAGAATTG
TTAAATTATG TTGGACTTAA TACTGAGCAT GCCAATCGTT ATCCTCATGA GTTCTCGGGT
GGGCAGCGTC AAAGGATTGG TATTGCAAGA GCTTTGGCAG TCAATCCGGA ATTCATCGTC
TGTGATGAAC CGGTTTCTGC ATTGGATGTT TCGATTCAAG CGCAGACTAT TAATATGTTT
GAGGATTTGC AGAATAAATT AGATCTTACT TATCTATTTA TTGCTCATGA CTTAGCGGTT
GTTAATCATA TATCCAATCG GATTGGTGTT ATGTATCTAG GCAACTTAAT TGAGCTGGGG
GAGAGTAATG AAGTAATTAA ACATAGTTTG CATCCTTATA CTAAGAGCTT AATCTCAGCC
ATACCAATTG CAGATCCTAT CAAAGCGAAA GCAAGTCAAC GAATCATCCT AAAGGGAGAT
GTTCCAAGTC CACTAAACCC ACCATCTGGA TGCCGTTTTT GTACCAGATG TCCCTATGCA
ACAGAAATCT GTACAGAGCA GAGACCGAAG ATGGAGGAAG TAGAAAGTGA GCATTTTGTT
GCATGTCACA ATATTTCAGC ATGTAATTAA
 
Protein sequence
MNENLVEVEN LKQYFYAGGI GKKAKYVKAV DDVSFYIRKG ETLGLVGESG CGKTTTGRSL 
LRLYEPTAGR IIYNNTVIFD KEKKIALDMM PYRKKMQVVF QDPYASLNPR MTVGEIIGEP
IGIHHLIQNK KDRQDRIIEL LNYVGLNTEH ANRYPHEFSG GQRQRIGIAR ALAVNPEFIV
CDEPVSALDV SIQAQTINMF EDLQNKLDLT YLFIAHDLAV VNHISNRIGV MYLGNLIELG
ESNEVIKHSL HPYTKSLISA IPIADPIKAK ASQRIILKGD VPSPLNPPSG CRFCTRCPYA
TEICTEQRPK MEEVESEHFV ACHNISACN