| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1994 |
|---|
| Symbol | |
|---|
| ID | 5744674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2459615 |
|---|
| End bp | 2461003 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641293091 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001559101 |
|---|
| Protein GI | 160880133 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.725365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGTTA AATTAATCCA ACCTAAAATG GAAAAAAGGC CAATGGATAC AGAAATAAAA
ATCCATATGG CGCCTCCTCT TGGACTACTA ACAATAGCAA ACTTACTTCG TGAAACTCAT
AAGATATCAA TAGAAAATGA AAATATACAA GCTATTTTAT TTGATGACGA CCCAGATATT
GTTGGTATAA CAGTGACGGT AGATGTTCTT CCACGTGCGA TTGAGATTGC AAGTGAGTTC
CGAAAAAGAG GGATACCGGT TGTTGCAGGC GGTATACATA TCACGACAGC AGCAAGCACA
ATCCCTGATG GGAGTTTCGA TGTTCTTTGC ATTGGTATGG CAGAAGGTAC ATGGCCATAT
ATCATGCAGG ATTTAGCGGA GGGCTGTCTA AAAGATAACT ACATATGTTC TGGTAATCTT
ACAGGACAAG ATATTATTTC ACCTGCTTAT GATTTGATTG ACTCTGACAA ATACTTGTAT
TGTAACGTGG TTCATACTAG TCGTGGATGC CCGTATCGAT GTGATTTTTG CTATAACAGC
AGCGCGTCAC GTCAATATAT AAATCGTCCT GTACAAGATG TTATAAAAGA CATACGTGCA
TTGAATTCGC ATCATATTAT GTTTATTGAT GATAATTTTA TCGGAAATCC ATCATGGACT
CATAGTCTTT TAAAGGAATT GAAGCCAATG CATCTAAAAT GGAACGCCGC TGTTTCTGCA
AACATTCTTG AGATGTTAGA TTTGCTAGAT GAAATGAAAG AGAGTGGCTG CCAAAGTTTG
TTCATTGGAT TTGAAAGTAT TAATCCAAAT TCATTACGGG ATGTACATAA AAAACAAAAT
GCTGTCAATA AGTACGATAA TCTCGTAGAT GCAATTCACA GTCGAGGAAT CATGATTAAT
GCAAGCTTTG TATTTGGACT TGACAGTGAT ACTTCTGAAA TATTTCAATC TACGCTTGAC
TGGATAGTAT CTCATAAAAT AGAAACGGTA ACATCTCATA TTCTTACCCC ATACCCTGGG
ACAGCATTAT ATGAGAGGAT GAAATCAAAA GGAAGGATTT TGACATCAGA TCTTTCACTT
TATAACACAG CACATGTAGT TTTTACCCCA GCTAATATGA CGGAAGAAGA ACTATATCAA
GGATATCTAT GGATTTACCG GAAAATATAC AGTTTTAGAA ACATCCTTAG GCGTATGCCA
AAATCCAAAA ATCAAATTTT ACCGTATCTA GCCTTTAATT TGTTTTACCG AAAATTTGGA
ATGTTTACAG ATATTTTTTG TAAATGGATA TCATATAAAC GCATTGGTCA TTGGGGGCAG
ATAGTATCAA AATATAATAG AAACCAAGTA ATGGTAAGGA GGAAAAATGA AAATAAAAAC
GTATCATAA
|
|---|
| Protein sequence | MYVKLIQPKM EKRPMDTEIK IHMAPPLGLL TIANLLRETH KISIENENIQ AILFDDDPDI
VGITVTVDVL PRAIEIASEF RKRGIPVVAG GIHITTAAST IPDGSFDVLC IGMAEGTWPY
IMQDLAEGCL KDNYICSGNL TGQDIISPAY DLIDSDKYLY CNVVHTSRGC PYRCDFCYNS
SASRQYINRP VQDVIKDIRA LNSHHIMFID DNFIGNPSWT HSLLKELKPM HLKWNAAVSA
NILEMLDLLD EMKESGCQSL FIGFESINPN SLRDVHKKQN AVNKYDNLVD AIHSRGIMIN
ASFVFGLDSD TSEIFQSTLD WIVSHKIETV TSHILTPYPG TALYERMKSK GRILTSDLSL
YNTAHVVFTP ANMTEEELYQ GYLWIYRKIY SFRNILRRMP KSKNQILPYL AFNLFYRKFG
MFTDIFCKWI SYKRIGHWGQ IVSKYNRNQV MVRRKNENKN VS
|
|---|
| |