| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1975 |
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| Symbol | |
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| ID | 5744655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2436461 |
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| End bp | 2438653 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641293072 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_001559082 |
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| Protein GI | 160880114 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000242777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGA AATGGTTTGT AAGCAATTTT AAGAAGAGAG TGATCTTGAT AGCTGCTTCA
TTATGCTTGT TGGTTAATAG TCCAATTGCA TACGCAGCAA GTGGTGAATC AGAATACGAT
GAAAAATATG ATGAAGTTTT AGAAGTCAGT AGTCTTGATG AAGATAATGT AAATACAGAT
ATTAATGACT TTTTTTATGG TGGTATGGAA AAGCTATCAG ATGATCCATA TCACTTTGAT
TATTCGAACA TGCCAAGAGG ACATCAATAC CGTGTTGGCG ATTTTCTATG TAATGGAACG
AGTCTAATAG CTTATCTTGG TAATGAGAAA AATGTAATCA TTCCAGAAGG AATTACATGT
ATTGGTCGTG AAGATGTACT ATTAAGCAGT GCTTTTGGTG GTAAACCTGT TGTTTCTGTT
ACATTTCCAA GTACACTAAA GGTTGTGGGG CAGTATACTT TTTATGAATG CATGGATTTA
AAGACTGTGA CCATGAATTC AGGGTTAGAA AAGATAGGTT CCTACTGCTT TTATAGTACT
GCACTAGAGA CGATTACAAT TCCGGAATCT GTGAAATTGG TAGGGGCCAG TGCATTTAGC
GAGGCAAAGA AATTAAAGAA GGTGAACATA AAGGGGAAAG ATATTCGATT CGATCAGAGG
GTTTTTGAGG AAACTCCCTT CCTAAAATCT TTGTATAATA AAGATAAAGT TGCGACTATA
GATAACTATC TTTTGGATGC AACAGGATAT ACAAAAGCAA AGTTTGTGGT TCCAAGCGCA
GTAACGAGTA TCGCGGGTTC AGCTTTCTTT TTGAACTGCG ACGTGAAAGA AATAGTGATG
CATGATAATG TAACAACGCT AGGTAGCGAA GTATTTCGCA ACTGTGAAAA TCTAAAGAAG
ATAACAATGT CTAAAAAACT CACAACGATT CCTTCTTGGG CATTTGTCAG ATGTGATAGT
TTGGAGGAAA TTACAATACC TGAATCTGTA ACGGAAGTGG AAAGTATGGC ATTTTCGGGC
CTGAATTGGC TTGAAAAAAT AAACTTTTTA TCAAAAACCA CCAATTTAGA AAGTGGTGTA
TTTGAAGGTA CACCTTGGAT GGCTGCACAA CAAGCAATAT CCCCATTTGT TATCATTAAT
GGAGTTCTAA TAGATGCAAC GAAGGCCTCT GGTAAAGTGG TAGTACCGAA TACAGTTAAA
ATCATCAACG ATGAAGCATT CGCAGGAAAT GAAGAGGTAA CAGAAATCAT ACTCCCTGAT
ACTGTAGTTA GAATTGATGA ATATGCATTT TGGTCATGTC CAAATTTGAA GAGTATTGAT
TTGGGTAACT CTGTAAAGAA AATAGGAGAA AGTGCATTTA AACTTTGTCC ATCACTAACT
GCTGTTGTTT TTCCTGATTC AGTAGAGGAA CTTGGGAGTT ATATGTTTAA AGATTGCAAT
GCAGTGGAAT ATGTTCGCTT GCCTGCCAAT CTAAAGCGAT TAGATGATTA TGTATTATCA
GATACGTCAA TTACCTCACT CGTGATTCCT AGCAGTGTAA CATTCATTGA TAGGTATGCT
TTGTCTTATT GCGACAAGCT TGAAAAACTC TATTTATCTT ATGAGTTAGA CGAAAACAGC
TATATTTTAG GTGGAGCAGG TTCAGAAAAT TTTGTTGTAT ATTATCCACA GGAGGAGAAA
TTTGACTGGT TAAACAAATA TATCGGTGAG ATAGGAAGTA GAATTGCTCA ATCTAATTAC
TCACTAAGCT ATAGTACGTT GACACTTTAT ACATCCTGGT ATGGTAAACA ATTGCAACTG
GAAGATGAAT TTCAACGCTT TGTTGCAAAT TCAAAGCTCA TATGGAAATC TGATAATACC
AAGGTCGCAA CTGTAACGAA TGGTAAGGTG ACTCCCGTTA GTACAGGTAC TACAACAATC
TCAGCAACTT ATGATAATAA GACTTATACT TGCACGGTAA CTGTGAAAGA TCCTTCCTTA
AATAAGTCAA AGGTCACTTT AACAAAATGG GATAGCACCT TCCTTTTTCT TTTGAATGCA
AAGACATCCG ATGTGAAATG GACAACTACT GATAAATCTG TTGTAACTGT ATTACAATCA
GGGATGATCC AAGCAAAAAA GAAAGGGACA GCTACAATCA CAGCGACAGT GAGTGGTAAG
AAATATTCAT GCAAGGTTAC TGTGAAGAAT TAG
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| Protein sequence | MRKKWFVSNF KKRVILIAAS LCLLVNSPIA YAASGESEYD EKYDEVLEVS SLDEDNVNTD
INDFFYGGME KLSDDPYHFD YSNMPRGHQY RVGDFLCNGT SLIAYLGNEK NVIIPEGITC
IGREDVLLSS AFGGKPVVSV TFPSTLKVVG QYTFYECMDL KTVTMNSGLE KIGSYCFYST
ALETITIPES VKLVGASAFS EAKKLKKVNI KGKDIRFDQR VFEETPFLKS LYNKDKVATI
DNYLLDATGY TKAKFVVPSA VTSIAGSAFF LNCDVKEIVM HDNVTTLGSE VFRNCENLKK
ITMSKKLTTI PSWAFVRCDS LEEITIPESV TEVESMAFSG LNWLEKINFL SKTTNLESGV
FEGTPWMAAQ QAISPFVIIN GVLIDATKAS GKVVVPNTVK IINDEAFAGN EEVTEIILPD
TVVRIDEYAF WSCPNLKSID LGNSVKKIGE SAFKLCPSLT AVVFPDSVEE LGSYMFKDCN
AVEYVRLPAN LKRLDDYVLS DTSITSLVIP SSVTFIDRYA LSYCDKLEKL YLSYELDENS
YILGGAGSEN FVVYYPQEEK FDWLNKYIGE IGSRIAQSNY SLSYSTLTLY TSWYGKQLQL
EDEFQRFVAN SKLIWKSDNT KVATVTNGKV TPVSTGTTTI SATYDNKTYT CTVTVKDPSL
NKSKVTLTKW DSTFLFLLNA KTSDVKWTTT DKSVVTVLQS GMIQAKKKGT ATITATVSGK
KYSCKVTVKN
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