| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1962 |
|---|
| Symbol | |
|---|
| ID | 5744641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2421915 |
|---|
| End bp | 2422892 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641293058 |
|---|
| Product | DNA polymerase III, delta subunit |
|---|
| Protein accession | YP_001559069 |
|---|
| Protein GI | 160880101 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTT TAAAACAACA TATTAAAACG AAATCCTATG AGCATTTCTA CTTACTATAT
GGAAATGAAG CTTATTTAAA ACGTTTCTAT AAAAATAAGC TAAAAGCAGG AATCCTTGGT
GATAGTGATG AAATGAATTT TACGTATGTC GAAGGAAAAG ATATTAATTG CAATGAGATG
ATTCATATTG CACAAACTAT GCCATTTTTT AGTGATAGAA GGTTATTACT GATTGAGAAT
AGCGGATGGT TTAAAAATCA ATCAGAATTT GCTGACTATA TAAGAGATAT GCCTGAAACA
ACATATGTCG TTTTTGTGGA AAATGAAGTA GATAAACGAA ATCGACTTTA TAAGGCAGTA
AAGGATTTAG GTTATATCAG TGAACTTAAT GGATTGGATG AAAAAAGTTT AAAAATGTGG
GTAGTATCTT TATTACAACG AGAAAATAAA AAGATCACTG ATGCTACTTT AACTTATTTT
TTAAACAAGG TTGGTACAAA TCTTGATAAC ATTCAAAGTG AGATTGATAA ACTTGTTTCT
TACTGCTATG AAAGAGAAGT TATCACGGAA GAAGATATCA AAGCAGTTTG TTCGGAGCAA
ATTACAGGTA AGATGTTTCA GATGTTAGAT GCCATTGCAT CAAAGAATCA AAAACTAGCG
TTAGAGATGT ATTATGATTT ACTCACCCTT CGTGAAAAAC CAATGACGAT TTTGTATCTA
TTAAATCGTC ATATTAATCT TATTATGCAG TGCAAAGCTT TACTTTCGAA ACGTACCAGT
AATGCTGAGA TTGCATCAAA GATAGGAGTA CCACCATTTG CGGTTGCAAA ATATGCTGCT
CAAGCAAGAA ATTTTACAGA AGAAAATCTA AAGAAGTCAT TGATTTTGGG AACAGAAATA
GAAGAGCAAG TAAAGACGGG ACGTTTAATT GATCAGATTG GTGTTGAGTT GTTAATTATT
AAGACGATAA TAAGCTAA
|
|---|
| Protein sequence | MNTLKQHIKT KSYEHFYLLY GNEAYLKRFY KNKLKAGILG DSDEMNFTYV EGKDINCNEM
IHIAQTMPFF SDRRLLLIEN SGWFKNQSEF ADYIRDMPET TYVVFVENEV DKRNRLYKAV
KDLGYISELN GLDEKSLKMW VVSLLQRENK KITDATLTYF LNKVGTNLDN IQSEIDKLVS
YCYEREVITE EDIKAVCSEQ ITGKMFQMLD AIASKNQKLA LEMYYDLLTL REKPMTILYL
LNRHINLIMQ CKALLSKRTS NAEIASKIGV PPFAVAKYAA QARNFTEENL KKSLILGTEI
EEQVKTGRLI DQIGVELLII KTIIS
|
|---|
| |