| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1934 |
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| Symbol | |
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| ID | 5744613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2388859 |
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| End bp | 2390790 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641293030 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001559041 |
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| Protein GI | 160880073 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATACAC TTAAAAGTAA ATTACGTGAC TTATACCGCC ATCCTGTGGG GTATGATGTC
ATCAATAAAA TTTTATTGCA GGCAGGTCTT TCCAAAGGGT TGATTGAAAA TCCTGTCATC
GGTGCTTTAC CTCTTTCCTT CCTCAATCGT ATTGCAGGAA AAAAACTAGG AAATGGCTTC
TTTGATGCAT TACTTGCCCT GTTAAATCAA TCCAACGACA GGCTTGATCC ATACTCATCT
AAGGATAAGA AAATTACTCC TACTTGGTGG AAGGAAGCTG TGTTTTATCA GATTTATCCT
CGCAGTTTCA TGGATGGAAA TGGTGATGGT GTCGGAGATC TTCCCGGTAT TATTTCGAAA
TTAGATTACT TAAAGGAGCT TGGCGTGGAT GCCCTCTGGC TCTCTCCTAT CTATGATTCT
CCAGGAGATG ACAATGGATA TGATATTAGA GATTACCAAA AGATTGATTC ACAATTCGGT
ACCATGGAAG ATTTTGATCT CCTGCTTACG GAACTTCATG CACGCAATAT GCGTTTAGTC
ATGGATTTGG TGGTAAATCA TACTTCCGAT GAACATCACT GGTTTAAAGA AGCGTTGAAA
TCTTCAGAAT CTACTTACCG AGATTATTAT TTTCTAAGAA AAGAACCGAA CAACTGGACT
TCTTTTTTTA GCGGTAGTGC TTGGAACCAC TATCCTGAGG AAGATCTCTG GGGACTACAT
CTATTTTCCA AAAAGCAAAT GGATCTAAAT TGGGAGAATC CAAAGCTTAG ACAAGATATC
TATCAAATGA TTCGTTGGTG GTTAGAAAAA GGGGTAGATG GCTTTCGCCT GGATGTAATC
AACTATATTT CTAAGGAGAC TGGACTACCG GATGGTGATT CCTTCATCGG AAATCTGATG
GGATTTACAG GAATTGAACA TTATTTTTAT GGACCAAAGC TTCATAACCA TTTGCAGGAA
ATACAGAAAG AGGCTTTCAC ACCTTATCAG GCTTTTTCTG TGGGAGAAAC TCCTGGTATC
GGAATGAAGA TGGGAAAACT TCTTACAGAC GATAGCCGTG GTGAGCTTAA TATGATGTTT
TCCTTTGATC ATCTAGAAAC CAGCGGACAT GCTCGATTTG ATCAATATGA GTATGATTTA
AATTATTATA AATCTTATAT TATGGACTGG ATGGAAAATT TCGCGGATAC CTCATGGATG
TCGCTTTTTT ATGATAACCA TGACAACCCT CGAATGCTTT CTAAAGTTGA CCATACCCAT
ACACATCGCC AGGAGCTTGC AAAGATGTTA GCCATGATTC AGATGACGTT AAAAGGTACT
CCTTTTTTGT ATCAGGGGCA AGAACTTGGA ATGATTAATA AAGATTTCCA CGAGATTAGC
AATTTTCGAG ATGTAGAAAG TATTAATAAA TATAAGGAAC TCTGTGAAAA AATGCCAAAA
GAAGAAGCTT TTCTTCAAAT CCTTGCAGGA AGTCGTGACC ATGCCCGTAC ACCTATGCAG
TGGTCAGCGA AACCTGGGTG TGGTTTCTCA AATGCAGTAC CTTGGATTGA CAGTGACGGC
GATGAATTAG TGTGTAATGC TGAGATTCAG ATGCAGGATT CAGAGTCTGT TTTATCTTTT
TATCGGGATT TGATTGCACT CAGGAGAAAA ACACCAGCAT TGATTTATGG AGATATTGAA
TTCACGCATA AGAAGCGGAA GGATATTTTG ATCTATACTC GTTACCTAGA GGGTGAAACT
TACCTGATTA TCTGTAATTT GAGTAATGAT GAGCAGAAAC TTCCGGGAAA TGTACCTGTT
TCGGAAAGTT TAGAAGGTTT GGAAAGTTTA TCTGCTTCTG CCGACGAAAG AAAGGGCTTA
GTACTCTGCA ATTATCCAGC GAAAGTCATG AAATCTCTTC GTGCTTATGA GGGTAGGGTT
TATCGTATTT AG
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| Protein sequence | MYTLKSKLRD LYRHPVGYDV INKILLQAGL SKGLIENPVI GALPLSFLNR IAGKKLGNGF
FDALLALLNQ SNDRLDPYSS KDKKITPTWW KEAVFYQIYP RSFMDGNGDG VGDLPGIISK
LDYLKELGVD ALWLSPIYDS PGDDNGYDIR DYQKIDSQFG TMEDFDLLLT ELHARNMRLV
MDLVVNHTSD EHHWFKEALK SSESTYRDYY FLRKEPNNWT SFFSGSAWNH YPEEDLWGLH
LFSKKQMDLN WENPKLRQDI YQMIRWWLEK GVDGFRLDVI NYISKETGLP DGDSFIGNLM
GFTGIEHYFY GPKLHNHLQE IQKEAFTPYQ AFSVGETPGI GMKMGKLLTD DSRGELNMMF
SFDHLETSGH ARFDQYEYDL NYYKSYIMDW MENFADTSWM SLFYDNHDNP RMLSKVDHTH
THRQELAKML AMIQMTLKGT PFLYQGQELG MINKDFHEIS NFRDVESINK YKELCEKMPK
EEAFLQILAG SRDHARTPMQ WSAKPGCGFS NAVPWIDSDG DELVCNAEIQ MQDSESVLSF
YRDLIALRRK TPALIYGDIE FTHKKRKDIL IYTRYLEGET YLIICNLSND EQKLPGNVPV
SESLEGLESL SASADERKGL VLCNYPAKVM KSLRAYEGRV YRI
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