| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1866 |
|---|
| Symbol | |
|---|
| ID | 5743155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2294555 |
|---|
| End bp | 2295754 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641292963 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001558974 |
|---|
| Protein GI | 160880006 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.908975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCGTA GAGTTATATC GAAAGAGGAA GCAAGGAAAT TTCTTATTCA ATATCATAAT
TTGGATGATT CCCAAAAATT CGAAGGTATT GATGGTGTAC TTGATTATTT TAATAGGGTA
GGGAGTATAC AGTATGATCC TTTAAATGTG GTTGGAAGAA ATGCTGATTT AGTGTTACAA
GCTAAAGTTA AAGGTTATCA ATCAAATCAT TTAGAAACAC TATTATACAA AGATTATAAG
CTAGTGGATG GGTTTGATAA AGAAATGTGC ATTTATCAAA TAGAAGATTA TAACAACTTT
CAAAGAGTAA GAGAAGCGAC AGCAAGAGCA ACGAAATGTG TGTTATCTAA TCGAAATCAA
TTGGAAGCTT TTGAATATTT AGAGGTTGTA AAAGAACATA TTAATACACA CGGGATTACC
AGTACTAAGG ATATTTCTAT TGGAGAGAGT AGTACGAGTC GATGGGGACA TAAGAAATTA
TCAAGTGCTA CACTGGATTA CTTATATAGC AGCGGAGAAT TGTTCGTTGT TAATAAAAAA
GGAGTACAAA AGTATTTTGA TTTAACGGAA AATGTTCTAT CAAAAGAATT CTTGAATAAA
GACAAAATGA AAAGTGATGA AGAATTTCTC AAATGGTATA TAAAAAGAAG AATACGTAGT
GTAGGGTTTT TATGGGATAA ACGAGGTGGA GCATGGCAAG GGCACTATAT AAGTGATCGT
AAAACTAGAA CAGAAGTATT ATCTAATCTG GTTTCAGAAG GTGAATTGAT TGCTTTTCAT
ATCGAAGGAA TCGATGAGAC CTTTTATATG GTAGCAGAGG ATGAAAGATT CTTTAATCAG
CCTCCAGCAA AGAAACAGGT AAAGTTCCTA GCTCCGCTTG ACAATATGCT TTGGGATAGA
GATTTAGTGT CTACACTTTT TGATTTTGAT TATCGATGGG AGGTTTATAC TCCTGTAATC
AAAAGAAAGT ATGGATATTA CGTGCTTCCT GTGTTGTATG GAGATAAACT TGTGGCAAGA
TTTGAACCGG AAAGAGTTAG TTATTCCGAG GTTTTCACAA TAAAAAACTG GTGGTGGGAA
GACACGATTA CGATAACAGA GGAATTGATT GAAGAGGTTC ATAGTGCAAT TCAAAGGTTT
GCGAACTATT TAGATATTCC TTGTAAGGAT AGCTACACTG AAATTTTATT GAAACGATAG
|
|---|
| Protein sequence | MCRRVISKEE ARKFLIQYHN LDDSQKFEGI DGVLDYFNRV GSIQYDPLNV VGRNADLVLQ
AKVKGYQSNH LETLLYKDYK LVDGFDKEMC IYQIEDYNNF QRVREATARA TKCVLSNRNQ
LEAFEYLEVV KEHINTHGIT STKDISIGES STSRWGHKKL SSATLDYLYS SGELFVVNKK
GVQKYFDLTE NVLSKEFLNK DKMKSDEEFL KWYIKRRIRS VGFLWDKRGG AWQGHYISDR
KTRTEVLSNL VSEGELIAFH IEGIDETFYM VAEDERFFNQ PPAKKQVKFL APLDNMLWDR
DLVSTLFDFD YRWEVYTPVI KRKYGYYVLP VLYGDKLVAR FEPERVSYSE VFTIKNWWWE
DTITITEELI EEVHSAIQRF ANYLDIPCKD SYTEILLKR
|
|---|
| |