Gene Cphy_1851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1851 
Symbol 
ID5743140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2279608 
End bp2280837 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content33% 
IMG OID641292948 
Productcytochrome c biogenesis protein transmembrane region 
Protein accessionYP_001558959 
Protein GI160879991 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein
[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACATA TCAATTTTAT TATTGTATTT TTAGAGGGGG TATTGTCCTT CTTATCGCCT 
TGTGTCATTC CTATTTTACC AATATATTTG GCCATATTGT CAAATAGCCG GAATGATAGA
AACAGAAATC GAGATATGAA AAGTGTTACT ATAAATAATG AGAATCATAC TGTTAAGCAA
GATAGTCGTG CTAATAAAAG AGTGCTATTA ACCAATACCC TCTTGTTTGT ATTTGGAATT
TCTACTACCT TCTTTCTTTT AGGAACAGGA ATAGGGATAT TTAGAACCTT TCTAACTGAA
TATAAACGGT ATTTCCTAAT AGTTGGTGGT GGCTTTATCT TTCTTATGGG GCTATTTTAT
GTGGGCGATA TTAAGATACC TTTTTTACAA AAAGAGAAGA GGATACAACT AAAAACTAAT
CAGATGAACC CAATCATAGC ATATTTATTA GGTTTCACCT TTAGTTTTGG ATGGACTCCG
TGCATCGGAC CGATGCTTGC TTCTGTGCTT GTGCTAGCGT CAACAAAACA AGATATTTGG
ACTGGAAACC TTCTTATTGG AATTTATACG TTAGGTTTTA TTATTCCATT CCTTATCGTA
GCCGCATTCT CGGATAAGAT GCTTAAATTA TTGGAAAAGG TCAAATTAAA GTCGGATAAG
CTGAAAACTT TTGGTGGTTA CGTCATACTA TTAATGGGAT TTCTTGTTCT ATTGAATGGA
ATAACAACAC CTAAGTTTAT TAGACCTACT TACGTCCAAG GAGAAAATTC GAATGGGGAA
TCTAAGAGCA TATTGGCTCC AGATTTTACT TTAATTGATC AATATGGGGA TACTCATACA
TTAAGCGATT ATAAAGGAAA AACTGTATTT CTTAATTTCT GGGCAACATG GTGTCCACCT
TGCAAACGAG AGATGCCTCA TATTGAAGAA ATCTATAAGG AATACGGTAG CAACAAAGAG
GATGTAATTA TTCTAGGTGT TGCTTTTCCA AATGATGGTG GAGAGAAGTC AAAACGAGGA
ATCATGTCAT TTTTAGAAGA GAAAAATTAT ACGTTCCCAG TAGTATTTGA TGAAACCTCA
AATTTATCTT ACTACTATAA TATTTCTGTA TTTCCTACAA CTTTTATTAT AAATCCAGAG
GGAAGTATCG AAGGATATTT TCAAGGAGGT ATGAGAAAAG ACGATATGAG AAATATAATA
GATCGCGTCA AGAATAATAG TGTAAAATAA
 
Protein sequence
MEHINFIIVF LEGVLSFLSP CVIPILPIYL AILSNSRNDR NRNRDMKSVT INNENHTVKQ 
DSRANKRVLL TNTLLFVFGI STTFFLLGTG IGIFRTFLTE YKRYFLIVGG GFIFLMGLFY
VGDIKIPFLQ KEKRIQLKTN QMNPIIAYLL GFTFSFGWTP CIGPMLASVL VLASTKQDIW
TGNLLIGIYT LGFIIPFLIV AAFSDKMLKL LEKVKLKSDK LKTFGGYVIL LMGFLVLLNG
ITTPKFIRPT YVQGENSNGE SKSILAPDFT LIDQYGDTHT LSDYKGKTVF LNFWATWCPP
CKREMPHIEE IYKEYGSNKE DVIILGVAFP NDGGEKSKRG IMSFLEEKNY TFPVVFDETS
NLSYYYNISV FPTTFIINPE GSIEGYFQGG MRKDDMRNII DRVKNNSVK