Gene Cphy_1845 details

Gene Information

• Locus tag: Cphy_1845
• ID: 5743134
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 2275424
• End bp: 2276128
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641292942
• Product: pirin domain-containing protein
• Protein accession: YP_001558953
• Protein GI: 160879985
• COG category: [R] General function prediction only
• COG ID: [COG1741] Pirin-related protein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAGAA AAATAGATAG TAAAACAATG GGTAAAAGTA ATCTTGGATG GCTTAACAGC 
ACTTTTCACT TTTCTTTTGC AGAATATTTT AATCCAACAA ACATCAATTT TGGTGTGTTG 
AGAGTAATTA ATGATGATTT GATTATACCT CATGAAGGGT TTGACACTCA TCCACATCAA 
GATATGGAAA TTGTATCGTA TGTGATTGCT GGAGAATTAA CACATGCCGA TAGCATGGGA 
AATAAACGTA CCTTAAAACG TGGTCAGGTT CAATATATGA GTGCTGGTAC TGGGGTATTT 
CATAGTGAGC ATAATTTAAG TGATGAAACT CTTAGATTAC TTCAAATATG GATTTTCCCA 
GATAAAAAGG GGTATCAACC GAATTACGGA GATTATTTGT TTGACTGGGA TCTAAGAAAA 
AATAATTGGT TGAATATAGT TTCAGGTAAG AATGGAGATG CACCAATTAA AATCAACCAG 
GATGTTAATA TCTATGTCTT AGAGCTTGAA AAGGACATGG AGGAGAAGTT TGAGGTTGAG 
AAGGGAAGGC AGGCTTATTT AGTGCAGATA GAAGGTGAAG CAAATATTAA TGAGGAGCAC 
CTTAATGCAA GAGACGCAAT GGAAATTAAA GAAGAAACAA TTTCTATAAA AGCTATCGAG 
ACTTCTCACT ATCTAGTCAT TGAAATGAGG AAAGATGGTA TCTGA 

 

Protein sequence

MIRKIDSKTM GKSNLGWLNS TFHFSFAEYF NPTNINFGVL RVINDDLIIP HEGFDTHPHQ 
DMEIVSYVIA GELTHADSMG NKRTLKRGQV QYMSAGTGVF HSEHNLSDET LRLLQIWIFP 
DKKGYQPNYG DYLFDWDLRK NNWLNIVSGK NGDAPIKINQ DVNIYVLELE KDMEEKFEVE 
KGRQAYLVQI EGEANINEEH LNARDAMEIK EETISIKAIE TSHYLVIEMR KDGI