Gene Cphy_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1827 
Symbol 
ID5743116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2257959 
End bp2258801 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content35% 
IMG OID641292924 
Productsulfate ABC transporter, inner membrane subunit CysT 
Protein accessionYP_001558935 
Protein GI160879967 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAAC GAAAAGTGAA AAATAATTCG GTAATACCGG GTTTTAGTTT AACCATGGGG 
ATTACACTGC TTATGTTTTC CTTAATTATC TTCATTCCGC TGGCCTCTGT TTTAGTATAT
TCTTTTCAGT TATCGCCAAG TGAATTCATT CAACTAATTG CAAAGAAAAA TGTAATAAAT
GCATTCAAAA CAAGTTTGCT TTGTTCTTTT GTAGCAGCTA TTATAAATTG TTTCTTTGGC
TTAATTCTTG CATGGGTTTT AGTGAGGTAT GAATTTATCG GAAAACGCCT GCTCGATGGC
TTGATTGAAT TACCATTTGC ATTGCCAACA GCAGTTGCAG GTATTACTTT GTCTAAGATG
TATTCTGATA CAGGTATCCT TGGGAGAAAA TTTGCAACGC TTAGAATTAA AGTATCCTAT
ACCAAGCTTG GAGTTACAAT AGCACTAGTT TTTATTGGAA TTCCTTTTGT TGTGAGAGCA
ATTCAGCCAG TCTTAGAGAA ATTGGATGCG CAGTATGAAG AGGCAGCTTA TATCTTGGGG
GCAAATAGGG TCACAACATT TTATAAAGTT ATTTTTCCTG AATTAAAACC TGCCCTACTA
ACTGGCTTTG GTTTAGCTCT TGCAAGAGGA ATCGGAGAAT ATGGAAGTGT AATTTATATT
TCCGGAAACA GTGCAAAGGA TCAAACTCAG GTTGTGTCAT ATGTAATCAT GCAAAAACTA
AATTATGTAG ATTATGCAGG TGCTACAGCA ATTGCTTTGG TTATGTTGAT TATATCCTTT
ACGGTATTGT TGTTTTTAAA TATCATTCAG GTACGTCAGA CTAAGCGTAC AAATAATGTT
TAG
 
Protein sequence
MVKRKVKNNS VIPGFSLTMG ITLLMFSLII FIPLASVLVY SFQLSPSEFI QLIAKKNVIN 
AFKTSLLCSF VAAIINCFFG LILAWVLVRY EFIGKRLLDG LIELPFALPT AVAGITLSKM
YSDTGILGRK FATLRIKVSY TKLGVTIALV FIGIPFVVRA IQPVLEKLDA QYEEAAYILG
ANRVTTFYKV IFPELKPALL TGFGLALARG IGEYGSVIYI SGNSAKDQTQ VVSYVIMQKL
NYVDYAGATA IALVMLIISF TVLLFLNIIQ VRQTKRTNNV