Gene Cphy_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1819 
Symbol 
ID5743108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2247692 
End bp2248612 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content36% 
IMG OID641292916 
Productribonucleoside hydrolase RihC 
Protein accessionYP_001558927 
Protein GI160879959 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA GACCAATTAT TATTGATACA GATCCAGGCA TCGATGATGC CTTAGCAATT 
GCAATAGCAC TATATGCGGG TGAATTAGAT GTGAAATTAA TAACTACGGT TGCTGGTAAT
GTAGGAGTTG ATAAAACAAC TTACAATGCG TTACGCTTAT TAAAGTTTTT TGAAAAAGAA
AGTATTCCTG TTGCAGTAGG CGCAGACAAG CCACTCATTA GACCATATGA AGATGCTAGT
TATATTCATG GAAAGAGTGG TATGGAAGGT TATGATTTTG AAGATCCAAC GTGTACGCCT
ATTACTGAGA ATGCTGTGAA TGCTATGAGA AGAATTATCA CGGAGAGTAA AGAACCAATC
ACAATTGTTG CAATAGGTCC ATTAACTAAT GTTGCACTTT TATTGAAAGT TTATCCTGAA
GTGAAAGAGA ACATAAAAGA AGTTGTTATG ATGGGTGGAA GTTTAAGCCG TGGTAATATG
GGCGTTATGT CAGAATTTAA CGTAGGCGTT GATCCAGAAG CTGCATATAT CCTTTTTCAC
AGTGGAGTAG ATATCGCGAT GGTTGGACTT GATATCGGTT TAAAAGCATT AGTATTACCA
GAAGATAGTG AAGAAATAAA AACAATGAAT AAAACTGGCG AAATGGCGTA TTGCTTATTT
AAAAAATATC GTGGTGGAAG CTTTAACACA GGTTTAAAAA TGTATGATAG TACTGCAATT
GCATATCTAC TTGCCCCTGA AATCTATGAA GTTGTAGATA CCTACGTAGA TGTTGAGCTT
GCTGGCTCAA TGACTGCTGG ATGTACGGTA GTTGATTTAA AAGGTTATTT AAAACAATCG
AATAATGCTA AAGTCTGTAT TGATGTTGAT GCAGATAAAT TCCGTAAGTG GTTCAAAGAA
TCGATTCGTA AATGTAATTA G
 
Protein sequence
MNKRPIIIDT DPGIDDALAI AIALYAGELD VKLITTVAGN VGVDKTTYNA LRLLKFFEKE 
SIPVAVGADK PLIRPYEDAS YIHGKSGMEG YDFEDPTCTP ITENAVNAMR RIITESKEPI
TIVAIGPLTN VALLLKVYPE VKENIKEVVM MGGSLSRGNM GVMSEFNVGV DPEAAYILFH
SGVDIAMVGL DIGLKALVLP EDSEEIKTMN KTGEMAYCLF KKYRGGSFNT GLKMYDSTAI
AYLLAPEIYE VVDTYVDVEL AGSMTAGCTV VDLKGYLKQS NNAKVCIDVD ADKFRKWFKE
SIRKCN