| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1815 |
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| Symbol | |
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| ID | 5743104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2241716 |
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| End bp | 2244034 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641292912 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_001558923 |
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| Protein GI | 160879955 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000180506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAAAA ATAATCTCAA TTATACTAAA CATTGTAATA TAAACGATAA AAATAAGCTT
TTAAAAAGAT TAATCAAATC ATATTTATGC TTCTTAATAA TAACGATATA CCTCATTCAG
TCATTACCTG TTAAGGCAGC AGATAGTACT TCAGATACCA GCGCTTCTGA TAATAATAGT
GTTAAAACAG GAAAGCAAAA GAGCGGAGAA CTTCATGCAT TTTATCCTTC GAACGCAGTA
TTTTCAGAGC AGATGAAACA GTACATAGAT GACTTAGAGT CCATAAGTTT TGCTTGGAGT
AGAATAGATG CAGAAGATTC TGGTTGTTTA AACTCTGTTA AAGGTCAGAA CGGTAATTAT
GGATTCTATT ATCCGAATGA CTATCTTCAA CCGTTAGAAT ATGCAAAGAG TCAGGGAAAA
TCAATCCAGT TAAATATATA TATGGATGGT CCCGATGGTA CAAAATTGTT ACCATATGCA
GACGAGCGAG CGGCCATGGT GTCCGCTATA GTAAATACTG TACAGAGCGA TCTTTCGCTG
GGAGAAGATA TTTACTATGA TGGTGTGGTA ATTGACTTTG AAGGGCTACG CAATACAGAT
GGAAATGGTA ATTCTATTCT TTATAATGGA AAGCCAATCA GTACTTATTA TACACAATTT
TTGACGGAGC TTAGGGAACA ATTTGACAGC ATCGGAAAAA ATCTGTATGT AGCAGTAAAC
CCAGCATTAT ATTTCGATGG TTATGATTAT TCCAAGATTC TTAATGTGGC TGACCGAGTA
ATTGTCATGG CACATGACTA TGAACCTGTA CAAAAAGTAC TAAAGAATCA GATAGAGCAG
TACACAGGCT ATAATGCTTT GGACCCTACC CATAGCCTTG CACCGATACA GATGGTTAGA
ATGGCATTAA ACGATATAAG AAATGCTGCT TCTAATACTT CAGAGCTTTC AAAGGTTTGG
TTACAGATTG CATTTGACAC TGCTCAGTGG CAGTTTGATG TAAAGAGTGC GAAGGAGTGG
ACTGAATTAC CTACCACAAC CTTAAGTAGG GGAGGAAGGC TTACCCCGTT ATATAAATCA
ATAAAGGCAC GTATCGATAA TACGGATGGT TATGGGCAGA ATTTAAGTTA TGGATATAAC
AATGAATTAC AAAGTCCATA CATTCAGTAC TTTAATACCT CTGACAAGTC TTGGAATGTC
ATTATCTATG AAGATAGTTC TAGTATTAGT GCTAAGATAG AATTAGCTAA GTCCTATAAT
CTTGGTGGTA TTTCTCTTTG GAGTCTTGCC AATATACCAG ATTATAATGA TACGAATGGG
AAGAAGTATC ATCTAAATGC TTGGAATACA ATAATAGCAG AAATGAAAAC TTATGATACA
TTACCGGCAG AAAGTAGTAA ATATGTTAGT TTTACAGATG CTTTCGTAGA AAAGGCAGTT
AGAGAAAAAC TTGGAAAAGT ATCAGGAAAG ATATCGGTGG AAGAGCTACA TGGTATTTAT
CGTTTGAAGC TACCAAAAGG AGTAAAAAGT TTAAAGGATT TGAATAAGCT AGCAAATCTT
GAGTATCTAG ATGCCGGACA GTTAGGTATA AAGGATATAA CAGCCATAGG TAATCTGAAA
AATATACGTG TGCTTTACCT TCAGCGTAAC TTGGTATCTG ATATTAGTGC TCTTAAAAAA
TTAACTAAGC TAGAGGTTCT ATCCTTAAAT GGTAATCAGA TTGAATCCAT CAGTGCTTTG
TCAACCTTAA CAAATTTGCG AGAGCTATAT ATACGTGAGA ATAAGATAAA AAATATATCA
TCACTAAATA AGCTGACAAA ACTGATACTA TTAGAGGGTG GGAAAAATAA TTTACAGAAT
ATTGACAGCC TTAAAAATTT GAAAAACATC AAGTCTTTAA CATTGGACAA TAATATTATT
AAAGATATTA CAGGGTTAAA GGTATTGACT AATTTAAAGT ATTTGGATTT ATCAAATAAT
AAGATTACTT CGATTAATGC GTTAAAAAAT CTGAGTGGAT TGGAGACTTT ATACCTTCAA
AGAAACTCCA TCACTGATAT TAGTGCAATT TCTACTTTGA AAAAGCTAAA GCTATTATCC
ATGAATGGAA ATAAAATTTC TGATGTAAAG CCTCTAACAA AGCTTGCTAA TTTAGAAAAG
CTTTATTTAA AGGATAATAA GATAAAAAGT ATTGCTTCTT TAAAAGGACT TGTTAATCTA
AATGAACTTT ATTTAATGGG AAATAGTGTT TCTAATTATA GTCCTGTTAA AACGATGTAT
GCTAAAAAGG GTTTTGTCTG TGATTTTAAA ATTAACTAA
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| Protein sequence | MEKNNLNYTK HCNINDKNKL LKRLIKSYLC FLIITIYLIQ SLPVKAADST SDTSASDNNS
VKTGKQKSGE LHAFYPSNAV FSEQMKQYID DLESISFAWS RIDAEDSGCL NSVKGQNGNY
GFYYPNDYLQ PLEYAKSQGK SIQLNIYMDG PDGTKLLPYA DERAAMVSAI VNTVQSDLSL
GEDIYYDGVV IDFEGLRNTD GNGNSILYNG KPISTYYTQF LTELREQFDS IGKNLYVAVN
PALYFDGYDY SKILNVADRV IVMAHDYEPV QKVLKNQIEQ YTGYNALDPT HSLAPIQMVR
MALNDIRNAA SNTSELSKVW LQIAFDTAQW QFDVKSAKEW TELPTTTLSR GGRLTPLYKS
IKARIDNTDG YGQNLSYGYN NELQSPYIQY FNTSDKSWNV IIYEDSSSIS AKIELAKSYN
LGGISLWSLA NIPDYNDTNG KKYHLNAWNT IIAEMKTYDT LPAESSKYVS FTDAFVEKAV
REKLGKVSGK ISVEELHGIY RLKLPKGVKS LKDLNKLANL EYLDAGQLGI KDITAIGNLK
NIRVLYLQRN LVSDISALKK LTKLEVLSLN GNQIESISAL STLTNLRELY IRENKIKNIS
SLNKLTKLIL LEGGKNNLQN IDSLKNLKNI KSLTLDNNII KDITGLKVLT NLKYLDLSNN
KITSINALKN LSGLETLYLQ RNSITDISAI STLKKLKLLS MNGNKISDVK PLTKLANLEK
LYLKDNKIKS IASLKGLVNL NELYLMGNSV SNYSPVKTMY AKKGFVCDFK IN
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