| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1809 |
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| Symbol | |
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| ID | 5743098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2233626 |
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| End bp | 2234207 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641292906 |
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| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
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| Protein accession | YP_001558917 |
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| Protein GI | 160879949 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00140749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAA CCGCTTTATT AAACATGGTA CCAAGGACTA GCACTAGTAA GGGTGCAAAT
AAGTTATTAA GGAACAATGG GTATTTACCA GGTAATATTT TTGGTAAAGG AATGGAATCC
ATATCGATAG CAGTTAAGAA GGATGAATTT AAAAAATCGA TAAAAGAATA CGGTAGAAAT
GCTGTATTTA AGCTTGTAGA TACTAATAAT AAAGAATACA CAGTTATGAC AAAAGAAATT
ACTGTGGCAC CTCTTATTAA TGAAATCTCT CATTTGAATT TTCAATTAGT ATCACTTTCA
GAGGCGATTA AACAAGAGGT AGCTTTTAAG ATTATTGGTA CAGAATTCCT TGAATCAAAA
AGATTACTTC TGAACAGTCA CGTGGATTCA GTTCCAGTAT CTGGATTACC ACATGATATT
CCTCATGAAT TAGAGATTGA TGTTTCATCC ATGAACTCTG GTGATAGTTT ATTATTTAAA
GATATAAAAC TCCCAGAAGG AATTACTTCC GATGTTGATC CAGAGCTAAA AATAATAACA
GTAAAAGGAT TAAAAAGACA GGAAGTAGCT GCGAGTGAAT AA
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| Protein sequence | MQETALLNMV PRTSTSKGAN KLLRNNGYLP GNIFGKGMES ISIAVKKDEF KKSIKEYGRN
AVFKLVDTNN KEYTVMTKEI TVAPLINEIS HLNFQLVSLS EAIKQEVAFK IIGTEFLESK
RLLLNSHVDS VPVSGLPHDI PHELEIDVSS MNSGDSLLFK DIKLPEGITS DVDPELKIIT
VKGLKRQEVA ASE
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