Gene Cphy_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1788 
Symbol 
ID5741461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2203765 
End bp2204748 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content38% 
IMG OID641292886 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001558897 
Protein GI160879929 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0243323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAT TAAAACGTCC AAGAAGATTA AGAACAAATC CATTGATTCG AACAATGACA 
AGGGAAACTA GGATGGATGC CTCATCCTTG ATTTATCCTA TGTTTGTGAA AGATGGAAAT
GGTATTAAGG AAGAAATACC ATCAATGGAA AATCAATATC GCTATAGCGT AGATATGCTT
CCGAAAGCTC TTTATGAAGC AGCAGATGCT GGAGTTAAGA GTGTAATGCT CTTTGGAATA
CCTGACAGTA AGGATGAATG TGGAAGTGGA GCCTATGCGG AGGATGGAAT TGTTCAAAGA
GCATTAAGAA TTGCAAAAAG AGAATGTCCA GATATGTACC TTATAACAGA TGTATGTATG
TGTGAATATA CATCTCATGG TCATTGCGGC ATATTAAAGG GTGACACGGT TGATAATGAC
GCCACTCTGC CATATTTAGC AAATATTGCG TTATCACATG TTGCCGCCGG TGCTGATATG
GTAGCACCTT CAGATATGAT GGATGGAAGA ATCAATGAGA TTCGTACCTT ACTTGATAAA
AACGGTTATA TAGATACACC AATTATGTCT TATGCTGTAA AATACAGCTC TGCTTTTTAT
GGTCCATTTC GTGAAGCTGC TGGTTCGGCA CCCGCATTTG GAGACCGAAA AAGCTATCAA
ATGGATTATC ACAACAGAAA AGAAGCTTTA AAAGAAGCTT TACTGGATGT AGAAGAAGGT
GCAGATATTA TCATGGTGAA ACCTGCGCTA TCCTATCTTG ATATTATTCG TGAGGTTGCT
AATGAGATCA CGTTACCGGT GGCCGCTTAT AGTGTAAGTG GAGAATATGC CATGATTAAA
GCTGCTGCAA ATTGCGGATA TATAGATGAA GATAGTATCG TTTGCGAATC CGCTACAAGT
ATATATCGTG CTGGATCGAA TATTTTAATA ACTTATTATG CAAAAGAATT GGCTAAATTT
ATTAAGGATG GGAGAATTGG ATAA
 
Protein sequence
MELLKRPRRL RTNPLIRTMT RETRMDASSL IYPMFVKDGN GIKEEIPSME NQYRYSVDML 
PKALYEAADA GVKSVMLFGI PDSKDECGSG AYAEDGIVQR ALRIAKRECP DMYLITDVCM
CEYTSHGHCG ILKGDTVDND ATLPYLANIA LSHVAAGADM VAPSDMMDGR INEIRTLLDK
NGYIDTPIMS YAVKYSSAFY GPFREAAGSA PAFGDRKSYQ MDYHNRKEAL KEALLDVEEG
ADIIMVKPAL SYLDIIREVA NEITLPVAAY SVSGEYAMIK AAANCGYIDE DSIVCESATS
IYRAGSNILI TYYAKELAKF IKDGRIG