| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1786 |
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| Symbol | hemC |
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| ID | 5741459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2201182 |
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| End bp | 2202087 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641292884 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001558895 |
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| Protein GI | 160879927 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000138949 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGC AAAAAATCGT GGTGGGTAGT CGAGATAGTA AATTAGCTGT AATGCAGACG
GAATTAATTA TGCACGAGAT TAATCGCAAT AACCCGGAAA TAGAGTTAGA GTTAGTTACG
CTAAAGACTA CCGGTGACTT AATACTAGAT CAAAGTTTAG ATAAGATTGG GGGAAAAGGT
CTCTTTGTTA AGGAATTAGA CCTAGCATTA CTAGATGGCA GAATTGATAT AGCAGTTCAT
AGTTTAAAGG ATATGCCAAT GGAAGAGAAC AAAGAACTAC CGATTGTGGC ATTACCAAAG
CGCGGGGATG CGAGAGATGT ATTAGTGTTG CCAAAAGGAT GTGAATTCAT TGAATATGAA
GATATGAACT TATACTATCA AAATATCGGA TCTTCTAGTG CAAGGAGAAA GTTACAAATA
CAAAAATTAT TGCCAAGTGC TGGTACTAGC GGTGTTCGCG GCAATGTTAT TACAAGACTG
GACAAATTAG ACAGAGGAGA GTATACTTCT TTGATTTTAG CAGCAGCAGG GTTACAAAGA
GTTGGCTTAC CACATCGTAT CAGTCATTAT TTTTCAGTGG AAGAGATGAT TCCGGCAGCA
GGTCAAGGTA TACTGTCCAT TCAAGCTAGG AGAGATTTAA ATGTTGATTT CCTAGAAAAT
ATCAAGGATG CTAATACAAC ATACGCTTCC TTAGCAGAGA GAAGCTTTGT CCGCACCTTA
GATGGGGGTT GTTCTTCACC AATCGCAGCA TATGCAGCAG TAGAAGGGGA AGAATTGAAG
TTAGTCGGCT TATATTATAA TGAGAAAACA ACAGAACATA GAGTTGCCAC AGTTGTAGAC
CACAAGGAAA GAGCAGAAAG AGTCGGAGAA CAATTGGCAT TACGCTTAAG AGGTGAGATT
GGATGA
|
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| Protein sequence | MKKQKIVVGS RDSKLAVMQT ELIMHEINRN NPEIELELVT LKTTGDLILD QSLDKIGGKG
LFVKELDLAL LDGRIDIAVH SLKDMPMEEN KELPIVALPK RGDARDVLVL PKGCEFIEYE
DMNLYYQNIG SSSARRKLQI QKLLPSAGTS GVRGNVITRL DKLDRGEYTS LILAAAGLQR
VGLPHRISHY FSVEEMIPAA GQGILSIQAR RDLNVDFLEN IKDANTTYAS LAERSFVRTL
DGGCSSPIAA YAAVEGEELK LVGLYYNEKT TEHRVATVVD HKERAERVGE QLALRLRGEI
G
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