Gene Cphy_1775 details

Gene Information

• Locus tag: Cphy_1775
• ID: 5741448
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 2183504
• End bp: 2189857
• Gene Length: 6354 bp
• Protein Length: 2117 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 641292873
• Product: S-layer domain-containing protein
• Protein accession: YP_001558884
• Protein GI: 160879916

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.83614
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACGAA ACAGAAAAAA AGAAAAGTCT ATCATTTCAA TTCTCATTAT TATTGGCATG 
ATATTCTCTA TGGTCCCAGC TCCAGTACAT GCTAAAGATT TCACGGATAC GAAAAAACAT 
CCTGCAAAGT CAGTGATTAG TAAATGGAGT GATTATGGTG TTATTCCTGA CCAGAAAAGT 
AAATTCTACC CAGATACCGA AATTACATTA GAAGATGCAG CATTGTTCTT GGCGCGACTT 
ATGGGATATC AGTCCAAAGT AGCATCCTCT TCCATCAAGG ATATCAGCAA AAGCAGTCAA 
AAGACCGCAG TTCTGAAAGC CGTGTATGCC GGGATCATAA CACCAAAGGA TGGATATATT 
AATCCCAAAG GCAAGCTTAG CCGCCAAGAT CTTGCAATCC TCCTTGGAAA GGCCTTTGCA 
CTCCCAGCGT CTACTGAGAA GCTAACCTTT AAGGACACTT CAACAATTTC GAAAGAAGCC 
TTACCTTATG TAAAATCAGC CATCAAAAAC GGTATCATGA AGCCGTATGC TGACAATACG 
TTTCATCCTA AAAAAGCAGT AACTCGTGCT GAATTTATCA CTATGATAGA TTCAATTGTA 
ATAAAATATT TTAACGAGGA CGGAACTTAT TCTAAATCAG TAACCGGAAC TGCTGTCATT 
AATACTGGTA ACATCACACT TAAGAAGATG CAGATTAATG GTAACCTGAT CATCGCGGAA 
GGCGTTGGTT CCGGTGATGT AACTCTTGAT AATGTAGAAA TAAGCGGACA ATTAATTGTT 
CGTGGAGGTG GAAAAAATTC AATACATATC ATTGGAAGCA CGAAAGTTGC AAATATCATC 
GTAGATAAAA AAGAAAAAGC TCCAGTTTCT TTAAAATTCT CTTCTTCGTA TGAAAGTAGT 
TCCGTAACTG TAATAAATGG AGAACTCTAC CTCTACGGTA ATATGAAAAG TCTGGATGTG 
AAAACGAGCA AAGCTATTCA TCTATTCAAT ACCTGTATGA CCAACCTAAT AGTCACTGAA 
AATGGGAGCC CTATTACAAT AGATGCCTCA TCTTCAATCA AAGCTCTCCA AGTGAAAGCC 
AATGACCGGA AAATTAATAT TAGCGGCGAA GTAGATCGTA TCGTCGTATC CGGTAACACA 
TCTGATAAAA GTAATCCAGT TATCACCATT AAGAACGGTG CCAGAATCAA CCAGATTACT 
CTCAATAAAA AAGCTACAAT TAATAATGAA GGTTCTATTA ATAATCTACT CGTAAACGTT 
AACAATGTAA CCGTCAAGGG TTCCAAACCG AATAATGTAA CCATAAATAA GAAAGTTACA 
ATTCCACCTG TTTTTTCGGA TACTCAGACA GACTCAACTG ATAAAGATCA CTCCTCTGAT 
TCTGGATCTT CTTCCGGTAA TGAGAACCCT TCCGATAACG GAAACTCTTC CGGGAATGGG 
AACCCTCCCG ATAACGGTAA TCAAGATAAC GATGCTCCCC TTACTGTTCC TCAGAATGTA 
GTAGTTCGAA GCGAATCCAA AGGTAATCTG ATTACATGGA ATTCTGTACA AGGTGCAACC 
GGATACAATA TCTATAAGGT TAACAGTCGT TTTTCTGATA TAAGCTCCGG AACTTGTATA 
AACGGGGCAA CTCCTGTTAC TAAACTAAGT TATACCGATA ATGGTAAGTC TAGTGATTAC 
TATATTGTTA TTGCAATTAA TAAAAAATAT GAAAGCAACC CATCGGATCC AATGAGCGCT 
GAAAAATATT TGTTTGGTCC TAATGTATAT ATTTACAGCC CTGATGATGA CAGCGCTAAA 
ATCCAAGCAG AAATGGATCG TATTTTCGCT CTTCAAGAAG GACCAGCTGC TCAATTCGGC 
GAGGGCCGTT ACGCAATTCT ATTTAAACCA GGAACCTATC AAGACATCAT TCCTCATATC 
GGATTTTATA CTCAGGTTTC CGGTTTGGGA AAAACTCCTC TCGATACCAA TTTGTCCTCT 
CTTTTAGTTG ATGCAAAATG GTTAAAGGAT AGCAATGGTA ACAATAATGC AACCTGTAAT 
TTCTGGCGTT CCGTAGAAAA CATCAATTTT GCAGGCAATT CCCAGTGGGC TGTTGCTCAG 
GCAGCACCGA TGCGCCGTAT CAACATTGAA GGCAATCTGC GATTGGACGA TGGAGGATGG 
GCAAGCGGCG GATACATTGC TGACAGCAAA ATATCCGGAA CCATCTCTGC CGGTGGACAA 
CAGCAGTGGA TCTCCAGAAA CACTTATATG GGTAATTGGA GCGGTGGTCA ATGGAATATG 
GTGTTTGTAG GTGATACAGG AACCATTCCT AGCGGCCAGA TAGGAAGTAC CGCAGGTAAT 
GTTACTGTTG TAGCGGAGGC TCCTATTGTA AGTGAAAAAC CGTTCCTATA TCTGGACAGT 
GACGAATATA AGATTTTTGT TCCTTCTATC AGAAAAGATG CTAGCGGTAC CTCCTGGTCC 
GATGGAAATA TAGGTTCCGG AACATCCATT TCTGTAAGTG ACTGCTTCAT CGCTAAGCCT 
TCTGATACTG CAGACATGAT AAATGCCGGA CTAACAGGTA AGAAGGGGCT TATTTTTACA 
CCCGGTATTT ATTATCTTAA TAAATCCATA AATATTACTC AAGAAAACTT TGTTGTACTT 
GGTCTGGGAC TAGCGACTCT GGTTCCTACC AACGCCAATA TCGCCATTGA TGTCTCCGAT 
GTTCCGGGGG TTAAAATATC AGGGATTATC TTTGATGCAG GATCCGGATG CTCTGACAGT 
ATGCTAAGAA TTGGTGCTTC AAAGAATACG AATGATAATT CCGCTAATCC GATTGTATTA 
AGTGATTTAT TCTTCCGTGT TGGCGGAGAT CTCATCGGAA AAGTAAACAA ATGTATTGAA 
ATCAATAGTA ATAACGTAAT CGGTGACCAT TTCTGGATAT GGCGAGCTGA CCATGGTAAG 
GAAGTAGCAT GGGATAAGAA TGTAGCTAAG AACGGACTTG TCGTAAATGG TGATAATGTT 
ACTGTCTACG GGTTGTTCTG TGAACATTTT CAGGAATATG AAACCTTATG GAACGGTGAC 
TATGGTAAAA TGTTCTTCTA TCAGAACGAG CTCCCTTATG ATGTCCCTTA TCAATCTGAT 
TGGATGAGTA AGGATGGTAC AGTAAATGGA TATGCAGCAT ACAAGGTCGC TGATCAGGTA 
GAGCATCATG AAGCCTGGGG ACTTGGCGTA TACGATGTAT TTATTCATAC ACTCGGATAT 
GTAGACCTTC ATAGTGCTAT CGAAGTACCG GATAAGGATG GAGTTAAAAT ACACAATGCA 
TGTATTGTAT CCTTAGGTAC GAATGATATC GAAAAATCTG CTGGTGGCGG CATTTCCCAT 
GTGGTAAATG AAGCAGGCGG CGGAGTAGGA CATCAGGGTG CAACCACAGG AGGCGGACAA 
TATGCAGAAG GTTTCCGCCA GAATGTTGCA GAATACTGTA ATCCTCTGCC GACCCCGATT 
ATTTCTGTTC CAACCGGTAG ATACGATACC ATGCAGACCG TATCAATTGT CTGCTCCGGT 
GCTGATATAA TAAAATATAC TCTTGATGGA AGCATGCCTT CCGCAACGAA TGGTACCCTG 
TATACAGGTC CATTCCTCAT TGGTGATTCA ACGAAGTCCT TGAAATTAAC TGCTGTTGGT 
TTTAAACAAG ACAAGATTTC ACTGTCCGCT TCCGTTATCA TTGCAGTAAG CGATGATATA 
GCACTATTTA AGCCAACCAG AGCTTCTTCC GTTAATGGAA GCAATTATGC TTACAACGTT 
AATGACGGTC TTACGATGGC ATCAAACCAC AGATGGGAAT CCAAACAAAA TACCTCTACA 
AGATATGATG ATCAGTGGAT TGAAATAGAT CTTGAGGAAA TCTACTCCAT ATCGAAGGTG 
GAACTAAGCT GGTACAGTGC TTCCTCCTGC GGATTTGACT ATAAAATTCA GATATCCGAT 
GACAGAATAA ACTGGACAGA TATTCAAACA ATAACCGGTA ATACAGCAAC TAATAATAAC 
TTTACTTATG GCACTGCTCA ACCATCCGGA CGTTATATCA GGGTGTATGG GACGCAAAAA 
AATGGTATGT ACGGATACTC CATGGGAGCC TTTAAAGTAT ACGGAAAACC ATATGTTGAA 
GGTAAAATTG ATCCGTTCAC AATTGAGATT GCTGCACCTA GGATCGGCCA GTCTCCCGCT 
ACCCTCTCTC CGGTAGAAAA CTCTCAGATG ACCTTTGGTG AGATATCCTG GAGTGGCGTA 
GCAGGTGCTA CCTTTGCAAC AGGTGATTCA CCGGTTGCCA CAGTAATTGC TACTGCAAAA 
GCCGGAAATA CCTTTGATGC AGTCAATTGG ATGGATTCTC TTAATACCAT TTTAATTACC 
GTAGCAGAAG CAAAAGAAAT TTCTTTTGTA CGTAACCCGG ATGGCACTAT GTTAACCATA 
ACGGTATCCT ATCTGATGTT GACAGAAGAT ACACCTCAAT CCGTATCCTC TGTAGTACAT 
TCCTCTTATG CAACTAATAC GGAGTTGACC ATTCAATTAA CTGGTACCAA AGAAATTATT 
ACCGGAGATG CTATTAATAT ATATACGACC GCTACCGGCG GAACGCCGAT TGCTTCCTTC 
ACTCTGATAC CGGGGAATGG AAATATCCAG ATAGTAAACT TACCTGTTGA GCCTTCCGGT 
AATATCTATG CTACTTATTA TCATAACGGA AGTGAACAGT CTCCCCGTGT ATTAGCAAGT 
GGCTATCACC CACTCGTAAA AGGTGGAATT GGAAGCGGAA CATCACAAAC CGTAGGGGCC 
ATTATTAAAT TATCTGATAC CCCTAATGGC GGTATCTCCG GTTTAACCTA TCAATGGCAA 
AAGAGCCTGG ATGGATTCTC AAACTGGGAA GACATTCCGG GAGCAACAGC AGATTCTGGT 
TTTACTGCAA CAAATGATCT TGCAGGTTAT TTTACAAGAA GGGTCACCTT TGCAGATGGA 
ATAACTGCGA AAGGCATGGC AGCTTCGGTT CCTGGAGGTC AAATACAGGC AATGAAAATT 
GCTCAAGCTG ATTTAACAGG TTACGGTCTT GCGGCACCGA CAGCCGGTAA CACAGCACCA 
ACTGCCTGCT CCGGATCATC AATTAAGTTT TCAGTAGACT CTATTGAGTG GCGCGGGTTA 
GACAGTGAAG GTAAGTACCA GGATAATTCC ATAGCTGTGG CACGAATTAC ACTTTCCGCA 
GCTGCCGGAT ATACCTTCTC CAACCTAACT GCCAGCAACA TTGCTGCTAC CTTTACTGCC 
GGCTCACCAA AAATATATAT TATTGATCTC CCTAGTCAGT TTGGCGGCAA CCTTGTATTT 
GAAGCAGTAT ATAAGCTTGG AACTCCTGCA TCCTATAGCG TTACCGTTCC GAATAGTATA 
ACTACAAACG GTGTCGTGGC GACAGTTACC TTAGCGCAAG GTCTTAACGC AGGAATATAT 
TATGTGGGAG AACCGGTAAT TGCAACCGTA GCATTAAACG GACCGGCAAC TCTTTCCGGT 
AAGCATACCG TTGAAATAAC CGGCACTTTC TTCTCTGTTA CACCCCTTGG TACCTATTCT 
ACGACAACGA ACGGACCGGT ATCTTCTACA TCCTTTGATA CCTCTAATTT CTTGCCAGCA 
GGTACCAATC CAAATGGAAA CATTAAGTTC CTTTATGAAT TTGATATGCC TTCCACTGGT 
ATAGCAGCAG GTGACCTAAC TCTGACACAT ACATTTTCAC CTGCAACGAA TATTGCATTA 
AAAGCACCTG CAAAGGCTTC CAGCATCAGT GCTACTAATA CAGCCAATAC AGCTGATAAA 
GCCGTAGATG GAGTAAAAGC TTCAACGCTT GGAAACCGCT GGGAGTCTGT TAATACTTCC 
GATGCCTCCG CACCGCAATG GATTGTTATT GATTTGGGAG ACGAATATAA TATATCCGAC 
CTTGCAATTT ATTGGAACAG CATGGCTTCC AGAGGTCGTT TTTATACAAT TGATGTATGT 
AATGACCTTG ATTGGAACCT TGAGGGAGAA GATCTCATGA ATTCCGGCAG CTGGATGAAT 
GCATGGACAG TTTCTCCTAA CGGTTGGAAT GGTAGCAGCA GTATCACCTC TGCTTCCCTT 
CTTAATATTC TTTCCTCTAA TTCTGTGGGT GGAGAATATA ACTGTGTAGC AACCGCAAGT 
GCGACTCCTA CTTATGGTCC TTCCAACACA CAGGGTGTAT TAGGTTCTAT CAGAGGTCCA 
AAATTCGGTA CAGGACGTTA TATTCGTATG TACGGTTGTG TCCGTGGAGA TTATACAACC 
ACTTCCGGAT TCTCTATCTG GGAAGTTGAA GTATATGGAA CCAAAGTAAA TTAA 

 

Protein sequence

MLRNRKKEKS IISILIIIGM IFSMVPAPVH AKDFTDTKKH PAKSVISKWS DYGVIPDQKS 
KFYPDTEITL EDAALFLARL MGYQSKVASS SIKDISKSSQ KTAVLKAVYA GIITPKDGYI 
NPKGKLSRQD LAILLGKAFA LPASTEKLTF KDTSTISKEA LPYVKSAIKN GIMKPYADNT 
FHPKKAVTRA EFITMIDSIV IKYFNEDGTY SKSVTGTAVI NTGNITLKKM QINGNLIIAE 
GVGSGDVTLD NVEISGQLIV RGGGKNSIHI IGSTKVANII VDKKEKAPVS LKFSSSYESS 
SVTVINGELY LYGNMKSLDV KTSKAIHLFN TCMTNLIVTE NGSPITIDAS SSIKALQVKA 
NDRKINISGE VDRIVVSGNT SDKSNPVITI KNGARINQIT LNKKATINNE GSINNLLVNV 
NNVTVKGSKP NNVTINKKVT IPPVFSDTQT DSTDKDHSSD SGSSSGNENP SDNGNSSGNG 
NPPDNGNQDN DAPLTVPQNV VVRSESKGNL ITWNSVQGAT GYNIYKVNSR FSDISSGTCI 
NGATPVTKLS YTDNGKSSDY YIVIAINKKY ESNPSDPMSA EKYLFGPNVY IYSPDDDSAK 
IQAEMDRIFA LQEGPAAQFG EGRYAILFKP GTYQDIIPHI GFYTQVSGLG KTPLDTNLSS 
LLVDAKWLKD SNGNNNATCN FWRSVENINF AGNSQWAVAQ AAPMRRINIE GNLRLDDGGW 
ASGGYIADSK ISGTISAGGQ QQWISRNTYM GNWSGGQWNM VFVGDTGTIP SGQIGSTAGN 
VTVVAEAPIV SEKPFLYLDS DEYKIFVPSI RKDASGTSWS DGNIGSGTSI SVSDCFIAKP 
SDTADMINAG LTGKKGLIFT PGIYYLNKSI NITQENFVVL GLGLATLVPT NANIAIDVSD 
VPGVKISGII FDAGSGCSDS MLRIGASKNT NDNSANPIVL SDLFFRVGGD LIGKVNKCIE 
INSNNVIGDH FWIWRADHGK EVAWDKNVAK NGLVVNGDNV TVYGLFCEHF QEYETLWNGD 
YGKMFFYQNE LPYDVPYQSD WMSKDGTVNG YAAYKVADQV EHHEAWGLGV YDVFIHTLGY 
VDLHSAIEVP DKDGVKIHNA CIVSLGTNDI EKSAGGGISH VVNEAGGGVG HQGATTGGGQ 
YAEGFRQNVA EYCNPLPTPI ISVPTGRYDT MQTVSIVCSG ADIIKYTLDG SMPSATNGTL 
YTGPFLIGDS TKSLKLTAVG FKQDKISLSA SVIIAVSDDI ALFKPTRASS VNGSNYAYNV 
NDGLTMASNH RWESKQNTST RYDDQWIEID LEEIYSISKV ELSWYSASSC GFDYKIQISD 
DRINWTDIQT ITGNTATNNN FTYGTAQPSG RYIRVYGTQK NGMYGYSMGA FKVYGKPYVE 
GKIDPFTIEI AAPRIGQSPA TLSPVENSQM TFGEISWSGV AGATFATGDS PVATVIATAK 
AGNTFDAVNW MDSLNTILIT VAEAKEISFV RNPDGTMLTI TVSYLMLTED TPQSVSSVVH 
SSYATNTELT IQLTGTKEII TGDAINIYTT ATGGTPIASF TLIPGNGNIQ IVNLPVEPSG 
NIYATYYHNG SEQSPRVLAS GYHPLVKGGI GSGTSQTVGA IIKLSDTPNG GISGLTYQWQ 
KSLDGFSNWE DIPGATADSG FTATNDLAGY FTRRVTFADG ITAKGMAASV PGGQIQAMKI 
AQADLTGYGL AAPTAGNTAP TACSGSSIKF SVDSIEWRGL DSEGKYQDNS IAVARITLSA 
AAGYTFSNLT ASNIAATFTA GSPKIYIIDL PSQFGGNLVF EAVYKLGTPA SYSVTVPNSI 
TTNGVVATVT LAQGLNAGIY YVGEPVIATV ALNGPATLSG KHTVEITGTF FSVTPLGTYS 
TTTNGPVSST SFDTSNFLPA GTNPNGNIKF LYEFDMPSTG IAAGDLTLTH TFSPATNIAL 
KAPAKASSIS ATNTANTADK AVDGVKASTL GNRWESVNTS DASAPQWIVI DLGDEYNISD 
LAIYWNSMAS RGRFYTIDVC NDLDWNLEGE DLMNSGSWMN AWTVSPNGWN GSSSITSASL 
LNILSSNSVG GEYNCVATAS ATPTYGPSNT QGVLGSIRGP KFGTGRYIRM YGCVRGDYTT 
TSGFSIWEVE VYGTKVN