Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1742 |
Symbol | |
ID | 5741416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2142860 |
End bp | 2144422 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641292842 |
Product | transcriptional regulator, CdaR |
Protein accession | YP_001558853 |
Protein GI | 160879885 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTTA CGAAGTTAAT AGAAAGAATT TCAGAAGAAT ATTCAATTGA TATCCTATCC CAAGGGGAAG ATTTAGAAAT ACAGGATGTT GCTTTGATTG ATAATAAACA TGATAATGCG ATTAGGACTA CTCTTTACTT TGGTTATGAC AAACAATTAA CAAACGCTGT GTCGGTTCCA TATCAATGCA TAATTGCTCG CACGGATCTT GCAGCGCCTC CCCTTTCCAC TGTGGGTAAT ATTGCTTTAG TATCGGAAGA CTCTTTATTT ACTATATTCA ACGATGCAAA AGCTTTGATT GAAACGACTC GTAAAGGGAT TGGAATTTTT GAGGAACTTA CTGCTCTCGC AGATAAAACC CATAACATTG AAGCCGTTAT TGATGCTGCC TCTGTAAGGC TTGGAAATTC TTTACTATTC TGTGATATGA ACTTTAAAAT CATTGCCAGT TCTACTTCTG TCCCTGTCCT CGATCCTCTT TGGAAAGAGA ATACGAAACA GGGATACTGC TGCTATGAAT TTATTAGTGA AGTAAAAGAA TTGAAATCTA TACGTAACGC TTCTCAGACT ACAGCCGCTG TTGAAGTTAC CTGCATCAAA TCCCCTTACC GTAAGTTAAG CAGTAAAGTT TTTCATAATC AAACTCAGAT TGGGTTCTTA TTGATGATTG AAGGAGAGAA CAATTTTCTT CCTTACCATT TTGAAATGCT AAGCATAATA AGCCATGTTA TTAGCTACAC CATAGCGTAC TATACACCTA ACCTTTTTGA AAAAAACAGC CTTTATCATG AATTATTATA TGATATGCTG ATTGGTGCGC CTGAAAAGGA TATCATGCCA AGACTGGCAG AACTACATTT TCCTGACAAA ATGCTGGTTC TATTCATTCG TCCTACAAAA TATCTTGGAC TACAGTACTT AAAAAGCTCT GTATGCAAGA ATCTGAAAAT ACAGATTCCC GGTACCCATG TTACTTATCA TAAAAACGGT ATTGTGGCGG TAATTCCGTT AAAGGAAGAT ACTGAAATGA ATTTAATGTT ACTAGAACTA TTGAAATGCT TTTCAAAAAA GGAACACATA CGAATTGGAA TCAGTAATTC TTTTGCTTGT ATTGAAAACT TTGTAAGCCA TTATGAACAA GCCCATGCTG CATTAAAGTT GGGTCATAAA TTAAACCCGG AAGGTTTGGT ATACCACTAT CAAAATTATC AGATTTTTGA TTTGTTTTCG GAAGCAAAGA ATCCCGATAA ATTAGGACGG TTCTGCCATC CTGCTCTGGC AGTTCTCCGT CAGTATGACC ATGAAAACAG TTCCCAGCTG TATAAGACCT TATGTGTCTT CATAAATAAG GGATGTAACA TTAAATTAAC TTCAGAAAGT TTATTTATTC ACCGAAATTC ACTTGTCTAC CGTTTAAATC GTATCACTGA ATTAAGCCAG GTTGACCTTT CAGACATTAA TACGCTTTTC CTGCTTCGAC TTTCTTTCCT CATTGACCAG TATAATGAGC AAAATAAAAG CTCGGCTAAA TCCTTTCAGC CTAATAATGC ATTAACAATT TAA
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Protein sequence | MTFTKLIERI SEEYSIDILS QGEDLEIQDV ALIDNKHDNA IRTTLYFGYD KQLTNAVSVP YQCIIARTDL AAPPLSTVGN IALVSEDSLF TIFNDAKALI ETTRKGIGIF EELTALADKT HNIEAVIDAA SVRLGNSLLF CDMNFKIIAS STSVPVLDPL WKENTKQGYC CYEFISEVKE LKSIRNASQT TAAVEVTCIK SPYRKLSSKV FHNQTQIGFL LMIEGENNFL PYHFEMLSII SHVISYTIAY YTPNLFEKNS LYHELLYDML IGAPEKDIMP RLAELHFPDK MLVLFIRPTK YLGLQYLKSS VCKNLKIQIP GTHVTYHKNG IVAVIPLKED TEMNLMLLEL LKCFSKKEHI RIGISNSFAC IENFVSHYEQ AHAALKLGHK LNPEGLVYHY QNYQIFDLFS EAKNPDKLGR FCHPALAVLR QYDHENSSQL YKTLCVFINK GCNIKLTSES LFIHRNSLVY RLNRITELSQ VDLSDINTLF LLRLSFLIDQ YNEQNKSSAK SFQPNNALTI
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