| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1741 |
|---|
| Symbol | |
|---|
| ID | 5741415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2141595 |
|---|
| End bp | 2142572 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641292841 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_001558852 |
|---|
| Protein GI | 160879884 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA ATATGTCTTA TGGTAGTGGC GGGGTTCAAA CTAGTAATCT GATCCACGAT
ATCTTTTTAA AGCATTTTAA CAATTCCATA TTGAACCGAT TGGAGGATTC CGCAGTTCTT
AATGTATCTG GTAAAATTGC TTATACAACG GATTCCTTTG TGGTAACGCC TATGTTCTTC
AAGGGCGGTG ACATCGGTAA ATTGGCAGTC TGCGGTACGG TCAACGATCT GACCATGATG
GGAGCGATTC CGAAGTATCT GACCTGCGGA TTCATATTAG AAGAGGGTAC GGAAATTGAG
ACTGTGGAGC GGATTGCAGA GTCTATGGCA AGGGCAGCAA AGGAAGCAAA GGTGAAAATT
GTTGCTGGTG ATACCAAGGT AATCGAAGGT AAGGGCGGTG TATATATTAA TACATCCGGA
ATTGGTGAGA TCGCCGTAAA TGGGGTAAGT GTGTCAGCTT GTAAGGAGGG GGACGCAATT
CTTCTCTCTG GAAATCTTGG CGAGCACCAT GCAGCAATCA TGTCAGAGCG CATGGGAATA
CAAAATGAGA TTTCTAGCGA CTGTGCACCG TTAACAGGAA TTCTAAACAA ATTCATCAAA
GAAGGGATAA AGGTTCATTT CATGAGAGAT GTGACTAGAG GCGGACTTGC CACCATCTTA
AATGAGATAA CCGACAGCTC GAACTGTGGT GTCGAAATTG AAGAAACAGC ACTGCCCATC
AGTAATGAGA TACGCGGCTT TTGTGATATC CTTGGGCTGG ATCCATTATA TATGGCTAAT
GAAGGCAAGA TGATCGCCGT AGTTCCTGGA AAACAGGCAG AGAAGGCTCT GGAGGCCATG
AGAAGTAGCG TCTATGGTAA GAATGCGGCA ATCATCGGCA GAATAACAGA AGGAAAAAGT
GTTACCATGA AGACCACTTT ACAGGGAACC CGAAGAATTG ATGTTCTTTA CGGAGAAGGT
CTGCCGAGAA TATGCTAG
|
|---|
| Protein sequence | MKINMSYGSG GVQTSNLIHD IFLKHFNNSI LNRLEDSAVL NVSGKIAYTT DSFVVTPMFF
KGGDIGKLAV CGTVNDLTMM GAIPKYLTCG FILEEGTEIE TVERIAESMA RAAKEAKVKI
VAGDTKVIEG KGGVYINTSG IGEIAVNGVS VSACKEGDAI LLSGNLGEHH AAIMSERMGI
QNEISSDCAP LTGILNKFIK EGIKVHFMRD VTRGGLATIL NEITDSSNCG VEIEETALPI
SNEIRGFCDI LGLDPLYMAN EGKMIAVVPG KQAEKALEAM RSSVYGKNAA IIGRITEGKS
VTMKTTLQGT RRIDVLYGEG LPRIC
|
|---|
| |