Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1724 |
Symbol | |
ID | 5741475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2123969 |
End bp | 2125384 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641292824 |
Product | multi anti extrusion protein MatE |
Protein accession | YP_001558835 |
Protein GI | 160879867 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTTA ATATGAGACA TAAAATGAAG TTATTGAAGT CCGGCTCAAA AGTAGATCTT TTTTTGGAAC GACAACTTGG CAGTAAGCTG TTTACATATA AAAAGATTTT TACTATGTTA ATTCCACTGA TATTGGATTC ATTCTTCATA AATGTAATCA TTTTACTGAC AACTGCTATG ATTAGTTCTT CCAGTCAAGA ATCTGTTTCA GCAGTTAGTA TGATAAACCC ATTGTCTCTG ATAATGTGGT CTATTTTTAG TGCAATTTCC GTGGGCGGTA CAGTAATTGT TGCACAGTAT AAGGGGAGTG GTAATGAAGC AAAAATCCGA GAAGCTGCAG GGCAGGTCAT GCTGGCAACA TTTTTGGTGG CGATTGCTTC TTGCATAATA CTGGTAGCAT TTTCAGACGT ACTGGTGCGG CGGATGTTTG GTGCGGCTGA TCCAATTGTT ATCAATAAAG CACGTGGTTA TCTTATTGGT GTAGCCATAT CACAGATATT TCTTTCTGTT TATATGGGGG CATTTGCGAT ATTTCGTGGC ATGGGTGCGA CAAAGATATG TTTGTGGTTA ACGATTATTA TTAATGTGAT ACATTTGTTA GCAAGCATGT TGTTTTTGAA TGTTATGCAT CTTGATATCT TTGGAACAAC GCTTTCGCTT AATATAGCAC GACTCATTGG TAGTGTGGTA GCAGTCTGGT TATTAATGTA TCCCAAGAGT ATATTACGAA TCTATCCTCG TAATATTTTT AGAATCAACA GACCGATTTT AAATTCGGTG TTCAAACTTG GAATTCCATT TGCACTTGAG CAAGTATTTT TTAACGCTGG GAGCATGATA GTACAAACCT ACATCGTGAG CCTAGGTACA ATATACATAG CAGCAAATGC CATTGCAAAT TCAGCATTTT CTATTCTATA TTCTGCAGGA CTTGGTGTGG GTACATTAGC GACTACCATT GTGGGACAAT GCATAGGTGC TGATGACGAT TCATTAGCAC GACATTACGG TATGATAATG GTTAGGCTTG GAACTGTAAT CTCAATAGTT TCAATCATTG TACTATTTCC GTTGATGCCG ATAATATTAA ATTTGTATCA GGCACCGGAA GAAACGCTTT CTATAATTAA TAAACTATTG CTTATCGCTA TAATCCCTAT GCCGTTTTTT TGGTCATATT CCTATGTAAT GCCATGTGTA CTTCGATCAA CTGGGGATGC AACGTTTAGT TCATTGGTTT CTCTGATTAC TATGTGGAGT GTCCGTGTAG GTCTTGGTTA TATATTTACA ATCAAACTTG GCTTTGGTGT ACAAGGCGTT TGGATCTGCA TGGGATTTGA ATGGGTGGTA CGGGCTCTGA TTTTTTATTT ACGATATCGA TCGGGTGTAT GGTTGTTAAA AAAAGTGATA AAATGA
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Protein sequence | MQFNMRHKMK LLKSGSKVDL FLERQLGSKL FTYKKIFTML IPLILDSFFI NVIILLTTAM ISSSSQESVS AVSMINPLSL IMWSIFSAIS VGGTVIVAQY KGSGNEAKIR EAAGQVMLAT FLVAIASCII LVAFSDVLVR RMFGAADPIV INKARGYLIG VAISQIFLSV YMGAFAIFRG MGATKICLWL TIIINVIHLL ASMLFLNVMH LDIFGTTLSL NIARLIGSVV AVWLLMYPKS ILRIYPRNIF RINRPILNSV FKLGIPFALE QVFFNAGSMI VQTYIVSLGT IYIAANAIAN SAFSILYSAG LGVGTLATTI VGQCIGADDD SLARHYGMIM VRLGTVISIV SIIVLFPLMP IILNLYQAPE ETLSIINKLL LIAIIPMPFF WSYSYVMPCV LRSTGDATFS SLVSLITMWS VRVGLGYIFT IKLGFGVQGV WICMGFEWVV RALIFYLRYR SGVWLLKKVI K
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