| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1711 |
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| Symbol | |
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| ID | 5741462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2101420 |
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| End bp | 2103282 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641292811 |
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| Product | endopygalactorunase-like protein |
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| Protein accession | YP_001558822 |
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| Protein GI | 160879854 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA GAATAGACAA TATTTATATG CCAATCGATA TAGAACCTAA TAAAAATTTT
TCTGTAAAAG TTAGAAGTGA AAACGATCAA CAGTGGCAAG AATTATTTGT TTACAATGTG
AGGGTAGGCC ACCAACAAAC ACCTTATGTA AACAGTGGCA TGGTCAAGTT TGATTTTGAA
GGAGCCATAG AAATTAGTAT AGATTATAAT GTCAGTGATA TAGCATCCTA TGAGATAAGA
CCAACCTCTT ACCATATTAG TGGGAAGCAG GAAGAAAGAA ATATTAAATT CAAGTTACAT
CAGGATGGAG AGAATTCTAA AAAATTAGTT GTAAGAATAA ACGATAATTG GGAGACCGCT
TGTTTGCACA TTTTGTCAAA TCCTATAGAG GAAGAAAAGC CAGTTAAGTA TGCTGAAAAT
ATTCACATAA TAAAGGCAGG TGATGAAATT CCTTTTTATT TACCAAAAGG GAAGGATACC
TATTATTTTG AAGAAGGAAT ACATGTTCTG CCTGGAGGCT TATGGATGGA ACATGATTTA
AAGAGAGTAT ATACAATCGA CAGATTTTTA ATAGAGCAAA GCCCTATTGT TTTATTAGGA
TACGCCGATG GATTAAGTTG TGAGATGCCA CAAAAATACA TAGTGGAAGG CAAAGAAACA
GAGGAAGAAC ATTATAAGAT ATTATTTGAT GGTAGAGATA ACTTGGCGCT TGGCATGATA
GAAGAAAAAA TTGCGTCTAT TAATGTAAGA TATGTAAGAA TACGTTTACT GGGAAGTATA
GGTGAGCGTT TTAGATACTC CAATGCGATA AAACAATTTA GAGTATATAA GGAGAATAGT
CATGAGGATT TAACAGTTCA GGCAGAGACA AGAGCAGCCA CTCCTAGTAT ACTGAATGGA
AAAGGAGTCT CTGAAACAGG ATACAGTAAT TGGCATGCAG CAGAAAGCTT TTTCTTGTGT
CAGGATCATT ATAAAGTGTA TTTAGCAAAT GGATCTGTTG TTAAGGGGGC ATTTGCGTCA
GATGAAGTCA ACCATATTAA AATATATGGC AGAGGTATTT TGGATTGCAC AGAGCTTAAA
CATTTTTTTA GGGTAGGGAG TGAAGATCGT ACAGGTGCTA TATGGCTTAT TAGTGGAAAG
AATTTAGAAG TAGAAGGAAT CACTGTATTA GATCCTCCTA TGTGGTCAAT CGTGTTAAAT
AATGGTGAAA ACATTAAGGT TAGAAATGTA AACCTCATAG CATCAGCGTT AAATGCGGAC
GGTATACATT TTAGCAGTAG TTCCAATGTT GAAATAGAGA ATTGTTTTAT AAGAACTTGT
GATGATTTGA TTGTATTGTA TCATTATGGA AAAGCACAGA ATATTACCGT AAAAAACTGT
GTATTATGGA GTGATGATGG TCATGCGTTT TTGTTTGGTC TAGGAAGTGT GAAAGATGCC
CCTATAAAGA ATATAAAAGT ATATCAATGT GATATTATTG ATCATAGAGC AGCCTGGGAT
TTTATTAAAT ATTCCGGTGC AATTAAGTTG TGGCCAAACG GGGGAAATCT TATGGAGGAT
GTTGTGTTTG ACACGATTAA TATTGATAGT TTTCAAATGC CAGAGAAAGC ATCCGTATTT
AAATTAACTA CTCATGAACG CCTTGAAAAT GAGGGGCATG GCATTTTAAA GAATGTTCTA
CTAAAAGACA TATATTATTG GGGATCAGGA GAGCAAAATG CATTAATCCA AGGAGTTAAT
GAGGCATTTC ATATTGAAAA TGTCAAGATA CAAAACTACT GTAGAAACGG TGTGAGAGTG
AAGGATACGA ATGATGGGCA CATTACAGTA AGTGGTTGTG TTAATGGGTT AACAATAGAG
TGA
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| Protein sequence | MKNRIDNIYM PIDIEPNKNF SVKVRSENDQ QWQELFVYNV RVGHQQTPYV NSGMVKFDFE
GAIEISIDYN VSDIASYEIR PTSYHISGKQ EERNIKFKLH QDGENSKKLV VRINDNWETA
CLHILSNPIE EEKPVKYAEN IHIIKAGDEI PFYLPKGKDT YYFEEGIHVL PGGLWMEHDL
KRVYTIDRFL IEQSPIVLLG YADGLSCEMP QKYIVEGKET EEEHYKILFD GRDNLALGMI
EEKIASINVR YVRIRLLGSI GERFRYSNAI KQFRVYKENS HEDLTVQAET RAATPSILNG
KGVSETGYSN WHAAESFFLC QDHYKVYLAN GSVVKGAFAS DEVNHIKIYG RGILDCTELK
HFFRVGSEDR TGAIWLISGK NLEVEGITVL DPPMWSIVLN NGENIKVRNV NLIASALNAD
GIHFSSSSNV EIENCFIRTC DDLIVLYHYG KAQNITVKNC VLWSDDGHAF LFGLGSVKDA
PIKNIKVYQC DIIDHRAAWD FIKYSGAIKL WPNGGNLMED VVFDTINIDS FQMPEKASVF
KLTTHERLEN EGHGILKNVL LKDIYYWGSG EQNALIQGVN EAFHIENVKI QNYCRNGVRV
KDTNDGHITV SGCVNGLTIE
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