| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1707 |
|---|
| Symbol | |
|---|
| ID | 5741538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2095571 |
|---|
| End bp | 2097463 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641292807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001558818 |
|---|
| Protein GI | 160879850 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1397] ADP-ribosylglycohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.754303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA CGTATGAAAA GTATTTTGAT AAGGTGTATG GAGGTTGGAT AGGAAAATGC
CTTGGAGGAG CGGCAGGTGC ACCTGTAGAG GGATTTAAGA AATTAATTGA ATGCAAAGAC
TATAAAGAAA TGTTAAGAAC AGATTTGCCA AATGATGATT TGGATTTACA ACTACTATGG
TTAGAGGTAC TGCAAAAAAA AGGATTCTAT ATTACAGCAG AGGATTTAGC TCATGCTTGG
GATAAACAGT GTTGGTATCC CTTTAGTGAA TATGGTATCT TTCTTAAAAA TTATGAAAGA
GGAATTATGC CACCTTTAAG CGGGAAGTTT AATAATCCTC TATTTTGTGA AGGAGAAGGG
TCCCCTATAC GGTCGGAAAT TTGGGGAATG AGCTTTCCAG GGAAGCCAGA AATAGCAGCA
AAGTATGCTG AAATGGATTC AAGCATAGAT CATTATGGCG AATCTGTTTG GATTGAACAA
TATTATGCAG CTCTAGAGGC AAGTGCGTTT TTTGAGTCAG ATATCCTAAC TTTATTAAGA
GAAGAGTTAC ACTATTTGCC AGAACTTTCT AGAGGTAGGA AATGTGTAGA AGAGGTCATC
TTATATTACC TTTCAGGAAA TAGAGATTGG ATAAAAGCGC GTACACGCAT GCTGCAAAGA
TACGGTCATC ATGAATTTAC GAACGCTGTT ACTAACTTAG GAATTGTTAT TATCGCATTG
CTGTATGGAG AAAACAATCT TGATAAAATC ATTAATATTG CTTTTCGATG TGGATTTGAT
ACGGACTGTA CCTGTGCTAC GGCAGCTTCT ATTTACGGAA TTATGATAGG ATATCAGGCT
ATTGATGAAA AACTGAAGAA TGCAATAGGA GACACCTTTG TAGTAGGAAT TGAGATAGAG
AGCAGTAATC GTTCTATTAA AGTGCTTGCT CAGGAAACCT GTGAAATTGG AATCAATGCG
ATGCAGATTG GTGGCAGTGA AATTATTAAT ATCCCTAACG ATATCATATC CAGAATATTA
TTAGAGATAA AAAAAGAGCT AGAAATTAAG GTATTGTATA GGCAGCAGCC GGCAATAGGG
TATATGGATC ATTGTGAATT TGATGTACAA ATTACCAATC AATCTGACCA AATGATAGAA
GATGTTGTAA ACTTTGAAAA TGTTCCAAAA GATTGGGATA TAAACTTTAG AGAACAAGCC
ATAAAAGTGC CAAGTGGTGA GACTGTTATA CTGACTGTTC ATATCACTAC AAATGAGAAG
GTTAATGTGA TTAATAATAC AAATATAATT ACCGTAAAGC TAGGCAAGCA TAAAAAAGAT
TTTGGAATTG CTGGAGCTAT GATATGGAAA ACGATCGGAC CTTTTACAGA GGAACTTGTA
AAAGAAGATA GAGAGGGGTT GCCTTCCCCG CATGGTGAAG GATGTATTCT ACCAACTTTA
GAGTGTATGG TAAATAATGC GGTATATCTG GACAAGGCTT ATATAGAGGA AAGTAACTTT
GATGATGCTT TTAAATCAGA TTATATTACG ATGAATGAAT ATGAAGATTT ACTGCGTTTA
GATGAAACAC TTACTTATAA AGGCCAGGGA TGTGTTTATC TGGAGCAGAC AATTATCTCA
CCAGAGGAAA GGGAGGTATG GTTGGTAATA GGAAACAATG ATGGTATTAA AATTTGGATT
AATGATGACC TGGTACTGAG TAAAGATGAG ATACGATTGT GGACCCCATA TAATAATTAT
GAGATTGTCA AGCTAAGAAA GGGCGAGAAT AAGGTTGTAT TAAAATTGCT TAAGAGAACA
GAGAACTTGA AATTTAGTTT TGGGATTAGA AAGTATGAAG GAGAACACTT TCATAGAAAA
CGTTGGTACG TAGATTTTAA GTCTAAACTG TAA
|
|---|
| Protein sequence | MNITYEKYFD KVYGGWIGKC LGGAAGAPVE GFKKLIECKD YKEMLRTDLP NDDLDLQLLW
LEVLQKKGFY ITAEDLAHAW DKQCWYPFSE YGIFLKNYER GIMPPLSGKF NNPLFCEGEG
SPIRSEIWGM SFPGKPEIAA KYAEMDSSID HYGESVWIEQ YYAALEASAF FESDILTLLR
EELHYLPELS RGRKCVEEVI LYYLSGNRDW IKARTRMLQR YGHHEFTNAV TNLGIVIIAL
LYGENNLDKI INIAFRCGFD TDCTCATAAS IYGIMIGYQA IDEKLKNAIG DTFVVGIEIE
SSNRSIKVLA QETCEIGINA MQIGGSEIIN IPNDIISRIL LEIKKELEIK VLYRQQPAIG
YMDHCEFDVQ ITNQSDQMIE DVVNFENVPK DWDINFREQA IKVPSGETVI LTVHITTNEK
VNVINNTNII TVKLGKHKKD FGIAGAMIWK TIGPFTEELV KEDREGLPSP HGEGCILPTL
ECMVNNAVYL DKAYIEESNF DDAFKSDYIT MNEYEDLLRL DETLTYKGQG CVYLEQTIIS
PEEREVWLVI GNNDGIKIWI NDDLVLSKDE IRLWTPYNNY EIVKLRKGEN KVVLKLLKRT
ENLKFSFGIR KYEGEHFHRK RWYVDFKSKL
|
|---|
| |