| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1681 |
|---|
| Symbol | |
|---|
| ID | 5741512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2061728 |
|---|
| End bp | 2063485 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641292781 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001558792 |
|---|
| Protein GI | 160879824 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.843196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAT TATTTAAAAA TTTAACTAAA AAAGAATGGC TATTTGTGGG TATCAGCTTT
GTGTTTATTA TAGCACAGGT ATGGTTGGAC CTAAAATTAC CAGATTATAT GAGTGAAATT
ACAATGTTGG TGCAGACCGA AGGTAGCACA ATGACTGAAA TCTTAACTGC GGGAGGAAAG
ATGTTAACAT GTGCACTAGG AAGTCTTGTT GGTGCTGTCA TTGTTGCTGT ACTAGCCGCA
AAAGTTGCTT CCAACTTCGG TGCCAGACTA AGAGGTCATC TATTTGATAA GGTGCAGTCC
TTTACGATGG AAGAAATCAA TAGATTTTCC ACATCAAGTT TGATTACAAG GTCCACCAAC
GATATTACAC AAGTGCAAAT GCTTGTTGTA ATGGGCTTAC AAGCTATGAT TAAAGCACCT
ATTCTAGCAG TATGGGCAAT TATGAAAATT AACGGTAAGA GTTGGCAATG GACATTGACA
ACAACACTTG CGGTATTGGT CCTATTAGTA GTTGTTGGTT GTTGTGTAAT TTTAGCAATG
CCTAAGTTTA AGAAGCTTCA AAAATTAACG GATGATCTAA ACCGAGTAAC GAGAGAGAAC
CTTACTGGTC TTCGGGTTGT TCGCGCATAT AATGCAGAAG AATATCAAGG TCGTAAATTT
GAAAAAGCAA ATACAGAATT AACTGGATCC AATTTATTTG CTAACCGTGT AATGGCTATG
ATGCTACCAA GTATTCAATT AGTAATGAGT GGTTTATCCT TAGCAATTTA TTGGGTGGGA
GCGATTCTAA TTCAAGAAGC TAGTATGATG GATAAAATGA CGTTATTTTC AGATATGATA
GTTTTCTCCT CTTATGCAAT GCAAGTGGTT ATGGCATTTA TGATGCTAAT TATGATTTTT
ATAATGTTAC CTCGTGCTTC CGTTTCTGCA AAACGTATTC TAGAAGTATT AGATACAAAA
CCAACTATTG TAGATGGACA GATTATGTCT TCAAAAACAA GATGCAAAGG TGAAGTGGAA
TTCAAAAATG TAAGTTTTAA GTATCCAGAT GCCGAGGATT ATGTAATACG TAATGTAAGT
TTCACTGCAA AAAAGGGAGA AACGGTAGCA TTTATCGGTT CCACTGGATG TGGTAAAAGT
ACGGTAGTGA ATTTAATACC ACGTTTTTAT GATGTAACAG AAGGGGAAGT TTTAGTAGAC
GGAATTAATG TGAAAGAATA TAGCCAATAC GCACTTCGTA ATAAAATCGG GTATGTATCC
CAAAAAGCAA CGTTATTTGG AGGAACTATC AAATCCAATG TTGCCTTTGG AGATAATGGG
AAGGATGGAT ATCTTGCTAC TGATATTATA GAGGCAGTTA GTACTGCCCA AGCAGCTGAA
TTTGTAGAAG CAAAAGAAGA AAGCTATGAT AGCTTTGTAG CGCAAGGTGG TGCCAACTTA
TCTGGTGGAC AAAAACAAAG AGTATCTATT GCCCGAGCGA TTTGTAGACA TCCAGAAATA
TTTATTTTTG ATGATTCCTT CTCAGCGCTA GATTATAAGA CAGACCGTAA ATTACGTGAT
GCATTAAAAC TTGAGTGCGC AGATGCTACC AAACTGGTCG TAGCACAACG TATTGGAACC
GTTCGTGATG CAGACAAAAT TGTAGTACTA GATGAAGGGG GAATAGTGGG AATTGGTACA
CATGAACAAT TAATGAAAAC ATGTGAAGTT TATCAACAAA TTGCGTACTC ACAATTATCG
AAGGAGGAGT TAGCATGA
|
|---|
| Protein sequence | MIKLFKNLTK KEWLFVGISF VFIIAQVWLD LKLPDYMSEI TMLVQTEGST MTEILTAGGK
MLTCALGSLV GAVIVAVLAA KVASNFGARL RGHLFDKVQS FTMEEINRFS TSSLITRSTN
DITQVQMLVV MGLQAMIKAP ILAVWAIMKI NGKSWQWTLT TTLAVLVLLV VVGCCVILAM
PKFKKLQKLT DDLNRVTREN LTGLRVVRAY NAEEYQGRKF EKANTELTGS NLFANRVMAM
MLPSIQLVMS GLSLAIYWVG AILIQEASMM DKMTLFSDMI VFSSYAMQVV MAFMMLIMIF
IMLPRASVSA KRILEVLDTK PTIVDGQIMS SKTRCKGEVE FKNVSFKYPD AEDYVIRNVS
FTAKKGETVA FIGSTGCGKS TVVNLIPRFY DVTEGEVLVD GINVKEYSQY ALRNKIGYVS
QKATLFGGTI KSNVAFGDNG KDGYLATDII EAVSTAQAAE FVEAKEESYD SFVAQGGANL
SGGQKQRVSI ARAICRHPEI FIFDDSFSAL DYKTDRKLRD ALKLECADAT KLVVAQRIGT
VRDADKIVVL DEGGIVGIGT HEQLMKTCEV YQQIAYSQLS KEELA
|
|---|
| |