| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1654 |
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| Symbol | |
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| ID | 5744475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2036308 |
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| End bp | 2037972 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641292754 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001558765 |
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| Protein GI | 160879797 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000278759 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA ATTCTCCAAG AGTTAATGGC GATAAAAAGA CTAATAGCAC AACTGTGAAA
GGAAATACAA CTTGGAAAGG AAATACTTCT ACGAAAGGAA GTATGAATGG AAAAGTAAAG
ATGAATGAAA AAGGAAATAC TTCTGCGAAA GGAAGTATGA CTGGCAAAGC AAATATGAAT
GAAAAAGGAA ATACTTCTAC GAAAGGAAGT ATAACTGGAA AAGGAATTAT GAATGAAAAA
GAAAATACTT CTAAGAAAGT AAGTATGACT GGCAAAGTAA GTATGACTGG AAATGAAAAT
ACTTCTACGA GAAGAAATAT GGCTGGGAAA GATAAAGCGA AAGGCCAGAA TGCTTATAAG
GAATCTAATG GAAAGCCAGA AAAGTCTTAT TATAGAACGG AACAAAAAGA GAACACAAAC
CCTAGGTCTC AGAGTAAGGG GACTATAGTA AAGAATAAGG AAGAAAAAAA CTCGGTAGAA
AAAGGTAGTA AACTAAGAAC TAGCAAAAAG AAGAAATATG GGGAATATGA ATGTCCTCAT
TCTAAAAAAT GTGGAGGTTG CCATTATCTT GACCTTCCAT ATGAAGAGCA ACTAAAAATT
AAACAAAAAC AGGTGTCGAA ACTATTATCT GATTTTTGCA AAGTTCATCC TATCCTAGGA
ATGGAACATC CTTATCATTA TAGAAATAAA GTCCAGGCTG TATTTGGACG TGATGCAAAA
GGAAATATAA TATCTGGTGT TTATAAAGAA GGAACCCATC AAATAATTCC GACTACCTCT
TGTTTAATAG AAGATAAAAA AGCAGATGAA ATAATTGGAA CAATTCGTGG TATGTTAAAA
TCCTTCAAGA TAAAAACATA CGATGAAGAT TCTGGATATG GCTTACTTCG CTATGTGTTA
GTAAAAAGAG GATTCACTAG TGGCGAAATC ATGGTTGTTT TAGTTATTGC TTCTCCAATA
CTACCATCCA AGAAAAATTT TGTAGCTGCT CTTAGAAAAG CTCACCCAGA AATTACAACA
ATAGTGTTAA ATATCAACAA TCGTACAGAT AGCTTAATTC TCGGAGACCG TGAAACTGTT
CTTTATGGAA AAGGATATAT TGAAGATACT CTATGTGGAA ATGTATTCCG TATATCATCA
AAATCCTTTT ATCAAGTGAA TCCTGTACAA ACAGAGCGCC TATACCAGCT AGCGATCAAA
GCAGCTGGAT TAACAGGAAA AGAAAGAGTA ATAGATGCGT ATTGCGGTAT CGGTACGATT
GGCTTAGTAG CAAGTAAAAA TGCGAAAGAA GTACTTGGTG TTGAGGTAAA TAAAGAAGCA
ATTAAAGATG CAATTGCTAA TGCAAAGCGA AATGGTATTA CAAATGAACA TTTCTACAAT
TCAGATGCAA CAGAATTTAT GCTTGCTATG GCTGAAAAAG GAGAAAAAGC AGATGTAGTA
ATCATGGATC CGCCGAGAGC AGGAAGTACA GAACAATTTA TAGATGCAGT TGAGAGCGTA
CAACCAAGCA GAGTTGTTTA TATTAGCTGT AATCCTGTTA CGCTGCAGAG GGATTTAAAG
TATTTTACAA AAAAAGGATA TCAGGTGAAG GAAGCTTGGC CAGTGGACAT GTTTCCTTGG
ACGGGGCATG TGGAGACGGT CTGTCTGCTA TATAAAATGA AGTAA
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| Protein sequence | MMKNSPRVNG DKKTNSTTVK GNTTWKGNTS TKGSMNGKVK MNEKGNTSAK GSMTGKANMN
EKGNTSTKGS ITGKGIMNEK ENTSKKVSMT GKVSMTGNEN TSTRRNMAGK DKAKGQNAYK
ESNGKPEKSY YRTEQKENTN PRSQSKGTIV KNKEEKNSVE KGSKLRTSKK KKYGEYECPH
SKKCGGCHYL DLPYEEQLKI KQKQVSKLLS DFCKVHPILG MEHPYHYRNK VQAVFGRDAK
GNIISGVYKE GTHQIIPTTS CLIEDKKADE IIGTIRGMLK SFKIKTYDED SGYGLLRYVL
VKRGFTSGEI MVVLVIASPI LPSKKNFVAA LRKAHPEITT IVLNINNRTD SLILGDRETV
LYGKGYIEDT LCGNVFRISS KSFYQVNPVQ TERLYQLAIK AAGLTGKERV IDAYCGIGTI
GLVASKNAKE VLGVEVNKEA IKDAIANAKR NGITNEHFYN SDATEFMLAM AEKGEKADVV
IMDPPRAGST EQFIDAVESV QPSRVVYISC NPVTLQRDLK YFTKKGYQVK EAWPVDMFPW
TGHVETVCLL YKMK
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