Gene Cphy_1633 details

Gene Information

• Locus tag: Cphy_1633
• ID: 5744454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 2013355
• End bp: 2013987
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 641292733
• Product: TetR family transcriptional regulator
• Protein accession: YP_001558744
• Protein GI: 160879776
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.124131
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAGA AGTTTTTGGA GCTACCTGAG GAAAAACAGT TACGAGTGAT AAATGCAACT 
ATGGAAGTTT TTGCAAAGAA TGATTATAAG CATGCTGTTA CGGATGACAT TGCATCTAAA 
GCAGGAATCT CGAAAGGATT ATTATTTTAT TATTTTAATA ATAAGAAAAA TCTATATTCG 
TATGTATTTC ACTATACTAT GGATATTATG CGAAAACAAA TTTTAGATGA AAAATTTCAA 
GAGATTGATG ATTTCTTTGA ATTACTCGAA TATGCATCGT ATAAAAAGTG TGTACTTATA 
GAAAGAAATC CATATCTTAT GGATTTTTCA ATGAAATGCA TATTTGGTGA TAAAGAGAAT 
GTGTCGCTAG ATTTGCAGAA AGACATTTCG CAAGAAACTG CAACGATTTT TTCGGTGTAT 
TTTAAAAATA TTAACCTTAA TAAATTCCGT GATGATATAT CACCAGAATA TTTAATTAGG 
ATGCTTACCT GGATATCTGA AGGTTATGTC CTTGAGAAAA AGATGCAGGG GAAGGAACTT 
GTGATTGATG AAATTATGGC TGATTTTAAA CAATGGACTC AGTATTTTCG AAAGATTGCA 
TACAAGGAGG AGTATTTAAA TGAAAGTAAT TGA 

 

Protein sequence

MNEKFLELPE EKQLRVINAT MEVFAKNDYK HAVTDDIASK AGISKGLLFY YFNNKKNLYS 
YVFHYTMDIM RKQILDEKFQ EIDDFFELLE YASYKKCVLI ERNPYLMDFS MKCIFGDKEN 
VSLDLQKDIS QETATIFSVY FKNINLNKFR DDISPEYLIR MLTWISEGYV LEKKMQGKEL 
VIDEIMADFK QWTQYFRKIA YKEEYLNESN