| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1584 |
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| Symbol | |
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| ID | 5744406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1949516 |
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| End bp | 1950559 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641292686 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001558697 |
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| Protein GI | 160879729 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.732832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAAAA GTATTGCATT ACTATTCTTA AGTTTTATTC TCCTATTCTC TGGATGTAAC
AAAGGTCATC GAGAAATTGA GGAAACAAAG AAGGAGGAAC CCAAAAAAAT ACAAATTGGA
ATGAGCTTTG ACTCCTTTGT GATTGAAAGA TGGCAGAGAG ATCGTGATAT ATTTGTTGCA
ACTGCCAATG ACCTAGGTGC AGAAGTCAAT GTTCAAAATG CCAGTGGGGA TGTGAATGAA
CAGGTACGGC AAATAGAATA CTTCATTGAA AAACAAGTGG ATGCGATTGT AATCATTGGA
ATTGATTCCG AGAAACTTTC CACAGTTGTA AAAAAAGCAA AGGAAAAAGG AATTAAAATC
ATTGCATATG ATAGGCTGAT TATGAATGCA GATGTAGATC TCTATATTTC CTTTGATAAT
GAAGCTGTTG GGAAGATGAT GGCGTCAGCA TTTGTCGAGA ACGGGCTAAC GAAAGGGAAA
GTACTTATGT TTTGCGGCCC AATGACTGAC AATAATGTTT CAATGATTGA AAAAGGATTC
CAAAGTGTCA TCAAGGAACA TGATATTGAG ATTCTAGACA TACTTCATGC GGATAATTGG
AGAGCAGAGG AAACTAGAAA GTATGTAAAT GAACATATCG ATGTAGTAAA AGAAGCAGAT
GCCATTATGT GTGGTAATGA TGGTCTTGCA GGACAAACGA TTTACGATTT GGCAGAACTT
AGATTAGCAG GTAAGGTCAT GGTAGTCGGA CAAGATGCAG ATCTTGAGGC ATGTCAAAGG
ATAGTAGAGG GAACGCAGTT AATGACTGTT TATAAGCCAG TTGCAAAACT TGCTCAAGCG
GCTGCAGAGG ATACGATTAA ACTAGTACTA GGCGAAGAGC TAGGCGCTAC CTCTGAGATT
AATGATGGAA GTTACGATGT TCCTTATATT GCTCTTGAAA CAATTGCTGT TACTGCAAAG
AATTTAGAGG AAGTAATCAT AAATAGCGGA TTTCATCTAA AGGAGGATGT ATATCTGAAT
GTTCCAGAAG AAATGCCAAA ATAA
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| Protein sequence | MKKSIALLFL SFILLFSGCN KGHREIEETK KEEPKKIQIG MSFDSFVIER WQRDRDIFVA
TANDLGAEVN VQNASGDVNE QVRQIEYFIE KQVDAIVIIG IDSEKLSTVV KKAKEKGIKI
IAYDRLIMNA DVDLYISFDN EAVGKMMASA FVENGLTKGK VLMFCGPMTD NNVSMIEKGF
QSVIKEHDIE ILDILHADNW RAEETRKYVN EHIDVVKEAD AIMCGNDGLA GQTIYDLAEL
RLAGKVMVVG QDADLEACQR IVEGTQLMTV YKPVAKLAQA AAEDTIKLVL GEELGATSEI
NDGSYDVPYI ALETIAVTAK NLEEVIINSG FHLKEDVYLN VPEEMPK
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