| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1563 |
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| Symbol | |
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| ID | 5744385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1920371 |
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| End bp | 1921045 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641292665 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_001558676 |
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| Protein GI | 160879708 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0444465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAAT TTAAGATACT TGAAATTAAG CAAAGCGTGT TTGAAGATAA TAATAAGGAT
GCAAATCTTC TTCGTGAGGA GTTAAAGCAA AAGGGAGTAT TTTTACTCAA TTTAATGTCT
TCTCCAGGAG CAGGTAAGAC TAGTACCTTA AAAAAGACAA TTTCAATGTT AAAAGAGGAG
ATGCACATTG GAGTTTTGGA GGCGGACATT GACTCTGATG TGGATGCAAA AACTATTGCT
GAAACAGGTG TTAAGGTAAT TCAGTTACAT ACTGGTGGGA TGTGTCATCT TGATGCAGAT
ATGACAAGAC AGGGGCTTCT CGGACTTGAT ACTTCAGGGC TAGACCTTGC TATCTTAGAA
AATGTTGGAA ACTTAGTCTG CCCTGCAGAA TTTGATACAG GCTCTAGTAA GAATGCTATG
ATACTTAGTA TTCCAGAAGG GGATGATAAA CCTCTGAAAT ATCCATTGAT GTTCTCTATT
GTGGATGTGT TATTAATAAA TAAAATGGAT GTGTTAGAAC ATTTTGATTT TGACTTAGAA
GCTTGTATGG AACGTGTAAG AAAAATAAAC CCAGACATTA AGATTATTCC GATATCGGCT
AGAACTGGTG AAGGAATTGA GATTTTCGCG GATTGGTTAC GAACAGAAGT TAAGAAGTGG
AAGGAAGTAG ATTGA
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| Protein sequence | MKEFKILEIK QSVFEDNNKD ANLLREELKQ KGVFLLNLMS SPGAGKTSTL KKTISMLKEE
MHIGVLEADI DSDVDAKTIA ETGVKVIQLH TGGMCHLDAD MTRQGLLGLD TSGLDLAILE
NVGNLVCPAE FDTGSSKNAM ILSIPEGDDK PLKYPLMFSI VDVLLINKMD VLEHFDFDLE
ACMERVRKIN PDIKIIPISA RTGEGIEIFA DWLRTEVKKW KEVD
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