Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1554 |
Symbol | |
ID | 5744376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1906256 |
End bp | 1907188 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 641292656 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001558667 |
Protein GI | 160879699 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATCATT TTGGTATTTT AATAAGAGAA TATCGTGAAA GTCTTGGTAT AAGCCGAAAG GAGTTATCAG AGGGCATTTG CACGGAAAAG TATATTTACC TTATAGAAAA AGGAGATCGT ACACCATCCG TCGACATCCT TAGCGTTATC AGTGAGCGAT TGGGTGTTGA TTTGTTTGAT TATTATCAGT ATCTAGGGTG TAATAATCCT ATCGTTGTAC GTGATGCACT AAGACAATTT AATATTTGTC GTAGGAAGTT TGATTTTATT GAACTTGAGA AGATTACAAA TACTGTTATT CAATATCCGG ATTTTAAATC AAAACCATGG CTTTATGAGA TAGAAGTCAA TTATCTCTTC ATTAACATAT TTAAGAAGAG AAATTATATA GACGGAAAAG AAAAAATTAT TAATTTGTTG AATGACATGG AAGCAAAGTA TTCAAACAGT TATTATGCAT TATTCCTATA TACTTTATTA ACGGTATGTT ACGAATTTAT AGATGATTTA ACGAGTGCCA AAGAGACATT ACAGATTGCA GAAAGAATTA TTGATAACAA AGAGAATATT GATAAGTTTA ATATTTTAAT TATAGCAGTA AAAGTGTGCT CAATTTCAAC ATCCTATCAT TCTGGTGAAT ATGAATTAGT AATACAAAAA GGAAATGAAT TTCTGCTATA TTTATATTCT TTAAGTGTTT ATTTGTACAT ATATTATGCG TATTTTTATC TATCTTTTGC CTATTACAAC CTTGGAAAAT ATGAGGAAGC AAGTGAATAT TTTAAAAAAG GATTTAATAG TCTAATGGTG GAAGATAAAC AAACGGATGT AAATATACTA TATGAGATAG AAGAATTTAA GATGTTATTA TATCGTAGTA ATCTAAAGCA ATATAGTATT GATGAATTTT TAAAAAGATA TAAGTTAATT TAG
|
Protein sequence | MNHFGILIRE YRESLGISRK ELSEGICTEK YIYLIEKGDR TPSVDILSVI SERLGVDLFD YYQYLGCNNP IVVRDALRQF NICRRKFDFI ELEKITNTVI QYPDFKSKPW LYEIEVNYLF INIFKKRNYI DGKEKIINLL NDMEAKYSNS YYALFLYTLL TVCYEFIDDL TSAKETLQIA ERIIDNKENI DKFNILIIAV KVCSISTSYH SGEYELVIQK GNEFLLYLYS LSVYLYIYYA YFYLSFAYYN LGKYEEASEY FKKGFNSLMV EDKQTDVNIL YEIEEFKMLL YRSNLKQYSI DEFLKRYKLI
|
| |