Gene Cphy_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1523 
Symbol 
ID5744345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1873259 
End bp1874320 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content34% 
IMG OID641292625 
Producthypothetical protein 
Protein accessionYP_001558636 
Protein GI160879668 
COG category[L] Replication, recombination and repair 
COG ID[COG3677] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00490598 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGATA TTAAAGACGT TTTTACACTG TATACTCAGC TTTCACCACA AGAACAGAAA 
AAGCTATACT CAATGATTTC ATATCAACTA CCTATTGATA ACGATTTTGA GCAATTTGTC
AAAGATGAAC GCTTTACGTC TGGATTCGTA TGCCCCCATT GCGGTTGTAT TGGTCATATT
TCAAGAAATG GTCATATTTA CAAAACTGAT AAAGACGGAA ACAAAACCAT TGATAAACAA
CGTTATGTCT GTAAGGACTG TGGAAAATCC TTTACTGTAT TATCTAACTC AGTTGCATCT
GGAACACGCA AGAATCTTAG TATTTGGGAA TCATTCACTA AATGTATGTT GAATGGTTTT
TCTGTACGTA AATCTGCGAA TATTTGTGGT ATTCACCGAA ATACAGCTTT TGCATGGAGA
CATAAACTCC TGGATGCCCT CCAGCAACCT GCTGAAAAAA CAAGATTGGA TGGTATTATA
GAAGCAGATG AAACCTTTTT TCGTGTTTCA TATAAAGGCA ATCATAAGAG AAGTTCCTTT
AAAATACCGA GAGAAGCTCG CAAACGTGGT GGTTTAGCAC ATAAAAGAGG ATTATCAAAA
GAGCAGGTCT GTGTCCCATG TGCTATTGAC CGAAAAGGTC ATTCTTATGG TAAAATAGCA
TCATTAGGAA GGATAGCAAC TAAGAATTTA CATGCTGTTT ATGATGGAAA AATCTGTTCT
GAATCAACTC TTTGTACGGA TAAAATGAAT GCTTATGTTA GATTTGCTAA AAGTAAAAAT
ATTCAGTTAA TTCAGCTAAA ATCAGGTAAA GAGAAAAAGG GAATTTACAA TATTCAAAGA
ATCAATAATT ATCATACAAA GCTTAAGAAG TTCATGGATA AATTTAATGG TGTGGCTACA
AAATACCTTA ACAACTATCT TGTATGGCAT ACTTGGTTTG ACTTAAAAGG TCATACACAA
CTTGAAAAAG CTGATTTGCT CTTAGCTAAA GCAATGACAA GTATTCTTTC TTTTCACTTC
AGACAATTGT CAATGCGTCC ATCAATACCA TTAAATATCT GA
 
Protein sequence
MPDIKDVFTL YTQLSPQEQK KLYSMISYQL PIDNDFEQFV KDERFTSGFV CPHCGCIGHI 
SRNGHIYKTD KDGNKTIDKQ RYVCKDCGKS FTVLSNSVAS GTRKNLSIWE SFTKCMLNGF
SVRKSANICG IHRNTAFAWR HKLLDALQQP AEKTRLDGII EADETFFRVS YKGNHKRSSF
KIPREARKRG GLAHKRGLSK EQVCVPCAID RKGHSYGKIA SLGRIATKNL HAVYDGKICS
ESTLCTDKMN AYVRFAKSKN IQLIQLKSGK EKKGIYNIQR INNYHTKLKK FMDKFNGVAT
KYLNNYLVWH TWFDLKGHTQ LEKADLLLAK AMTSILSFHF RQLSMRPSIP LNI