Gene Cphy_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1514 
Symbol 
ID5744336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1862596 
End bp1864533 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content40% 
IMG OID641292616 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001558627 
Protein GI160879659 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.200814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTACG AAAAACTATT TAGTCCAATA AAATTAAGAG GCTTGGAATT AAAAAATCGA 
ATTATGTTTC CTGCGATGGG AACGAAGATG CCCACTGAAG AAAAGCAAGT GAATCAACAA
CTGATAGACT ATCATGTAGC TAGAGTGAAA GGTGGATGTG GATTAAACTT TACCGAGGTT
TGCTCCGTGT ATCGTTTGGC TTCCCCTAAA AAATTCTTAG CAATTAGTGA AGATAAATAT
ATTCCGGGAT TAAAGAAATT AGCTGATGCC ATTCATGAAG CTGGTGGAAA AGCGGGGGTA
CAGTTATGGC TTGGAGGTTT TGCTGTTGCA AGTGACCCAG AACAGATGAT TATTATACCA
AGTGATGTTC CTGTGCCGGG TACTGAATAT ACACTGCCAG GAGCTAGTAT TGAGACAATT
AAAGAAGCGG TGAATGCATT CGGTGAGGCT GCAAAAAGAG CTGTTGAAGC AGGATATGAT
ACGATTGAAT TTCATGCTGG GCATAATTAT ACACCTCACT CCTTTTTAAG CCCATATTTT
AATAGAAGAA CGGATGAATA TGGAGGAAGC CTTCCTAACC GTGCAAGATT TTTAATTGAA
TGTATCGAAG CTATACGACA GAACATTCCA GAGGATATGC CGTTATTCAT GAGACTTGAT
GCTCATGATG ATTATCTTGA GGGCGGACTT ACGATTGAGG AAGTTATTGA ATTTTGTAAG
ATGGCAAAGG CATCCGGCGT GGACGTACTG GATGTTTCTA GAGGTAATTT CTCAACAGCA
GCAATCAAAT ATGAGGTTCC ACCGATTGAC TTACCTAGAG GCTTTAATGT TGAAAATGCT
GCAAGAATCA GAAAAGAAAC GGGCATGATT ACAGTAGCAG TTGGTAGAAT TAATGATCCT
TTACAAGCAG AGACAATACT AACAGATGAT AAAGCGGATA TGGTTGTTAT TGGACGTGCA
CAATTAGCAG ATCCTGAATT TTGTAATAAG GCAAAGGAGG GACGGGAAGG CAGTATTGTA
CGCTGCGTAG GCTGTAATCA AGGATGTTAT GACGGATTTG TATCGACAGA GATGCCATTT
ATCACTTGTT TAAGAAATCC AGCTCTCGGA AGAGAAGCGG AATATCAACT TACCGAAACA
ACGAACCCTA AGAAGGTGTT AATCATTGGC GGTGGTATCG GAGGCTTGGA AGCTGCCCTT
CAGTTAAAAA GAAGAGGTCA TCAGCCAATC TTATGTGAAG CCTCAGGAAC GCTTGGAGGT
CAGTTTGCTT TAGCAGGAGA AGCACCAAGA AAAGAGGAGA TGAAACTAGC TGCCATTGCA
ATGGGTGAGC AAGTGAAGAG TGAAGGTGTT GAGGTAAGAC TTAATAAACC GGTTACAGAA
GAATTAATCA AGCAGATTAA TCCAGAGGAA GTAATTATAG CGGTAGGGTC TGCTCCAATC
GAATTAAATA TTCCGGGAGC AAAACTTTCT CATGTGACGA ACTCACATGA AGTACTTGCT
GGTAAAAAAG AAGTTTCAGG CAGAGTTGTA GTAATTGGTG GCGGTCTTGT TGGTCTAGAG
GTTGCTGAAT ATATTCATGA GATGGCAGAC CATATTACAG TAGTAGAAAT GCTTGATCAG
GTCGCAAAGG ATCTTGGTCA GCTACGTAAT ATTTGTGTTA TGGAAAGTCT ATATGCTTCT
GGTGTAGAAA CAGTAACCAA TGCAAAATGT GTTGAAATAA AAGAACATGC AGTAGTTGTA
GATAGAATGG GTAATTTGGA AGAAATCCCT TGTGAATTTG TTGTCGTAGC TATCGGTGCA
AAGTCACGTA ATTTTGATAA TATTATCACA TACTGTAAGG AAAATAACAT AGCGACTCAT
GTTATTGGAG ATGCTATACG AGCAAGAAGG GCTCTTAACG CAGTTGCTGA GGCAAATGAA
GTGGCTAGAG CTATATAA
 
Protein sequence
MAYEKLFSPI KLRGLELKNR IMFPAMGTKM PTEEKQVNQQ LIDYHVARVK GGCGLNFTEV 
CSVYRLASPK KFLAISEDKY IPGLKKLADA IHEAGGKAGV QLWLGGFAVA SDPEQMIIIP
SDVPVPGTEY TLPGASIETI KEAVNAFGEA AKRAVEAGYD TIEFHAGHNY TPHSFLSPYF
NRRTDEYGGS LPNRARFLIE CIEAIRQNIP EDMPLFMRLD AHDDYLEGGL TIEEVIEFCK
MAKASGVDVL DVSRGNFSTA AIKYEVPPID LPRGFNVENA ARIRKETGMI TVAVGRINDP
LQAETILTDD KADMVVIGRA QLADPEFCNK AKEGREGSIV RCVGCNQGCY DGFVSTEMPF
ITCLRNPALG REAEYQLTET TNPKKVLIIG GGIGGLEAAL QLKRRGHQPI LCEASGTLGG
QFALAGEAPR KEEMKLAAIA MGEQVKSEGV EVRLNKPVTE ELIKQINPEE VIIAVGSAPI
ELNIPGAKLS HVTNSHEVLA GKKEVSGRVV VIGGGLVGLE VAEYIHEMAD HITVVEMLDQ
VAKDLGQLRN ICVMESLYAS GVETVTNAKC VEIKEHAVVV DRMGNLEEIP CEFVVVAIGA
KSRNFDNIIT YCKENNIATH VIGDAIRARR ALNAVAEANE VARAI