Gene Cphy_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1501 
Symbol 
ID5744323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1848945 
End bp1850408 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content38% 
IMG OID641292603 
ProductN-acyl-D-glutamate deacylase 
Protein accessionYP_001558614 
Protein GI160879646 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3653] N-acyl-D-aspartate/D-glutamate deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGATG CCAAAGGTCT AGTAGTTGCA CCTGGTTTTA TTGATACACA TTCACATAGT 
GATTTAGATG TTTTATTGCG CCCTCAGGTA ATGCCTAAGG TAATGCAAGG TATCACGACT
GAATTTTTAG GTCAGGATGG TGTTTCTATG GCACCACTTC CAGTGGAATA TATCTCAGAT
TGGCGTAAGA ATATCGCTGG ACTTGATGGA GTAAGTGACG AAATTGACTG GACCTATCAA
ACAACCGACA ATTATTTAAA GATGATTGAG AAAGTTGGCC CTGGTATTAA TGAGTGCTAT
CTAGTTCCAC ATGGAAATAT TCGTATGGAA GCAATGGGAC TTGGTAATCG CCAACCAACA
GACGAAGAAA TCGAGAAGAT GAAAGAGATT ACACGTAGAG AGATGGAAGC AGGAGCTTTT
GGTTTATCTA CAGGTTTAAT CTATATTCCT TGTGCATATT CAGAAAGTAA GGAAATCATA
GAAATGTGTA AAGTAGTTGC TGAATTTGAT GGTGTATTTG TAATTCACCA ACGTAGCGAA
GCTGACACTA TTGTTGATTC TATGAATGAA GTAATAGAAA TAGGCAGAAA ATCAGGAGTT
AGAGTTCACT GGTCTCACTT TAAAGTTGCA GGTAAGAAGA ACTGGGATAA AATAGATACT
GTACTTTCTC AATTAGAGCA AGCAAGAGCT GAAGGTATCA GAGTAAGCTT TGATCAGTAT
CCTTATGTTG CAGGTAGTAC TATGATGGGT GCGATTTTAC CACCTTGGGT ACATGATGGC
GGAACGAATA AAGTTATCGA ACGTCTTAGA GATCCAGAAA TGCGTAAAAA GATGCGTTAT
GATATGGAAA ATGGTATTCA TGGTTGGGAT AACTTTGTAG ACTTTGCAGG GTTTGAAAAT
ATCTACGTTA CCAGTGTAGT AACAGAAAAA AATAAAGATG CAGTAGGCTT AAGTATTACT
CAGTTAGCAG AACTTCGTAA TCTAGATGCA TATACAGCAG CTTTTGACCT CTTAATGGAA
GAGGAAAACG CAGTTGGTAT GGTAGACTTT TATGGAGTAG AAGACCATGT GAAATTATTT
ATGGCTCGTC CTGAGATGAA TGCATGTACC GATGGCTTAT TAGCACCAGG AAAGCCACAC
CCACGACTTT ATGGAAGCTT CCCAAGAATC CTTGGTAAGT ATGTCCGTGA AGAGAAATTA
ATGTCTATAG AAGAAGCAGT AAGAAAGTTA ACTTTCAAAG CAGCTGATGC TATGAGTCTT
AAAGACAGAG GGCTTTTAAA AGAAGGTTAC TTTGCAGATA TTACAATATT TGATCCTAAC
ACGATTGAAG ATAAAGGAAC TTTCGTTGAT CCAATTAAGT TCCCAGTCGG TATTGAATAT
GTTATTGTAA ATGGTAAGGT TGCTGTGGAA CACGGAAAGC ATACTGAAGT ACTAAACGGT
AAAGTAGTAA GAAATAAAAG ATAA
 
Protein sequence
MIDAKGLVVA PGFIDTHSHS DLDVLLRPQV MPKVMQGITT EFLGQDGVSM APLPVEYISD 
WRKNIAGLDG VSDEIDWTYQ TTDNYLKMIE KVGPGINECY LVPHGNIRME AMGLGNRQPT
DEEIEKMKEI TRREMEAGAF GLSTGLIYIP CAYSESKEII EMCKVVAEFD GVFVIHQRSE
ADTIVDSMNE VIEIGRKSGV RVHWSHFKVA GKKNWDKIDT VLSQLEQARA EGIRVSFDQY
PYVAGSTMMG AILPPWVHDG GTNKVIERLR DPEMRKKMRY DMENGIHGWD NFVDFAGFEN
IYVTSVVTEK NKDAVGLSIT QLAELRNLDA YTAAFDLLME EENAVGMVDF YGVEDHVKLF
MARPEMNACT DGLLAPGKPH PRLYGSFPRI LGKYVREEKL MSIEEAVRKL TFKAADAMSL
KDRGLLKEGY FADITIFDPN TIEDKGTFVD PIKFPVGIEY VIVNGKVAVE HGKHTEVLNG
KVVRNKR