Gene Cphy_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1468 
Symbol 
ID5742418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1810822 
End bp1811781 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content45% 
IMG OID641292570 
ProductABC transporter related 
Protein accessionYP_001558581 
Protein GI160879613 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00475192 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACAAA CAGAACACCT TTCAAAGACT TACCGAAATG GCTTTAAGGC TGTCAAAGAT 
TTAAATCTTC ATGTGAACAA GGGCGACATT TTTGGATTTC TAGGACCGAA TGGCGCGGGA
AAGACCACAA CCATACGAAT GCTTGATGGG TTGCTTGAAC CGACCGCCGG ACAGGTTTTT
ATCGACGGCA TGGATGTCAA TAAGCAAGCA TTGGAAATAA AGAGGCTTAT TGGAGTTGTA
CCAGAATCTC ACGGATATTA TGACTGGATG ACCGCAAAAG AATATCTGCA ATATTTTAAC
TCTTTATTCG GCGGAAACGA AGGGGACGTC TATCTCGAAG AGCTGCTCAA AAAGGTGGGG
CTTCGAGAAA AAAAGAACGT GCCGGTAGGC GAGTTCTCAC GCGGAATGAA GCAACGTTTA
GGTATTGCAA AAGCCTTGGT AAACCATCCG AAGATTATTT TTCTTGATGA GCCGACTCTG
GGACTCGATC CAAGTGGGCA GAGAGATATC CAGCAGCTTA TCCGAGAAAT TAATCTGAAT
GATGGCATCA CTGTTTTCAT CACTTCCCAT CTGCTTAAGG ATATTGAGGT ACTGTGCAAT
AAGGTCTCCA TTATCAAGGA TGGAATCCTT GTGGAGCAAG GCAGTATTAA GGAACTTCAG
GGAAGATATG TAACTGCTTA TACGATCCTG CTTCAAACAA ATGACAACGA TTTGGCTCTG
TCGCTCATTC AAAGGCTCGA CGGTATTAGC GATGTATCAA AAGGTGAGAG ACAACTTGTC
GTGCGGCTTT CCGAGGGACT TGACGCAAAC GAAATTAGCA CGGTCAAGCG GAACTTGGCA
GGCACCGTTT TCACAGCGGG CATAGATATC CGGGAAATGA CGCATAAGAC CCTCAGCATG
GAAGATATCT TCTTCAAGGT GACGGAAAGC AGTCAGATTG GAAGGGAGGC GGTTCTATGA
 
Protein sequence
MIQTEHLSKT YRNGFKAVKD LNLHVNKGDI FGFLGPNGAG KTTTIRMLDG LLEPTAGQVF 
IDGMDVNKQA LEIKRLIGVV PESHGYYDWM TAKEYLQYFN SLFGGNEGDV YLEELLKKVG
LREKKNVPVG EFSRGMKQRL GIAKALVNHP KIIFLDEPTL GLDPSGQRDI QQLIREINLN
DGITVFITSH LLKDIEVLCN KVSIIKDGIL VEQGSIKELQ GRYVTAYTIL LQTNDNDLAL
SLIQRLDGIS DVSKGERQLV VRLSEGLDAN EISTVKRNLA GTVFTAGIDI REMTHKTLSM
EDIFFKVTES SQIGREAVL