Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1468 |
Symbol | |
ID | 5742418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1810822 |
End bp | 1811781 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641292570 |
Product | ABC transporter related |
Protein accession | YP_001558581 |
Protein GI | 160879613 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00475192 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACAAA CAGAACACCT TTCAAAGACT TACCGAAATG GCTTTAAGGC TGTCAAAGAT TTAAATCTTC ATGTGAACAA GGGCGACATT TTTGGATTTC TAGGACCGAA TGGCGCGGGA AAGACCACAA CCATACGAAT GCTTGATGGG TTGCTTGAAC CGACCGCCGG ACAGGTTTTT ATCGACGGCA TGGATGTCAA TAAGCAAGCA TTGGAAATAA AGAGGCTTAT TGGAGTTGTA CCAGAATCTC ACGGATATTA TGACTGGATG ACCGCAAAAG AATATCTGCA ATATTTTAAC TCTTTATTCG GCGGAAACGA AGGGGACGTC TATCTCGAAG AGCTGCTCAA AAAGGTGGGG CTTCGAGAAA AAAAGAACGT GCCGGTAGGC GAGTTCTCAC GCGGAATGAA GCAACGTTTA GGTATTGCAA AAGCCTTGGT AAACCATCCG AAGATTATTT TTCTTGATGA GCCGACTCTG GGACTCGATC CAAGTGGGCA GAGAGATATC CAGCAGCTTA TCCGAGAAAT TAATCTGAAT GATGGCATCA CTGTTTTCAT CACTTCCCAT CTGCTTAAGG ATATTGAGGT ACTGTGCAAT AAGGTCTCCA TTATCAAGGA TGGAATCCTT GTGGAGCAAG GCAGTATTAA GGAACTTCAG GGAAGATATG TAACTGCTTA TACGATCCTG CTTCAAACAA ATGACAACGA TTTGGCTCTG TCGCTCATTC AAAGGCTCGA CGGTATTAGC GATGTATCAA AAGGTGAGAG ACAACTTGTC GTGCGGCTTT CCGAGGGACT TGACGCAAAC GAAATTAGCA CGGTCAAGCG GAACTTGGCA GGCACCGTTT TCACAGCGGG CATAGATATC CGGGAAATGA CGCATAAGAC CCTCAGCATG GAAGATATCT TCTTCAAGGT GACGGAAAGC AGTCAGATTG GAAGGGAGGC GGTTCTATGA
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Protein sequence | MIQTEHLSKT YRNGFKAVKD LNLHVNKGDI FGFLGPNGAG KTTTIRMLDG LLEPTAGQVF IDGMDVNKQA LEIKRLIGVV PESHGYYDWM TAKEYLQYFN SLFGGNEGDV YLEELLKKVG LREKKNVPVG EFSRGMKQRL GIAKALVNHP KIIFLDEPTL GLDPSGQRDI QQLIREINLN DGITVFITSH LLKDIEVLCN KVSIIKDGIL VEQGSIKELQ GRYVTAYTIL LQTNDNDLAL SLIQRLDGIS DVSKGERQLV VRLSEGLDAN EISTVKRNLA GTVFTAGIDI REMTHKTLSM EDIFFKVTES SQIGREAVL
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