| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1395 |
|---|
| Symbol | |
|---|
| ID | 5742345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1736693 |
|---|
| End bp | 1738969 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641292498 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001558509 |
|---|
| Protein GI | 160879541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00458705 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAAA ATACGTTTTT ATTCTATGAT AAGCCTGCAA ATGCTGATAT TTGGGAGGAG
GCACTCCCGT TAGGAAATGG TTCTTTTGGA GCAATGTTAT ATGGTAATGT TGAGGAAGAA
GTTATAAAAC TGAACCAAGA ATCGGTTTGG TACGGTGGAT TTCGGAATCG CATCAATCCC
GATTCTAGGA AGGTATTACC CAAGGTGAGA GAGTTGATTT TTGATGGACA GTTGAAGGCA
GCGGAGGAAC TTGTCTATAC CAGCATGTTT GGTACGCCAA TTTCACAGGG GCATTATGAA
CCTTTAGCCG ATTTAAGAAT CGCTTTCAAT AAAAGGATTC TGCATCATAG TGAGCAGTGG
CAAGAACGTC AGATAAACCA TTCAAATTAT AAGCGGTTTC TTGACTTACA AACGGCTTGC
TATAATTCTT CCTATACTTG GAGGGAAACT GATTATAAGA GAGAAGCACT TATCTCATAT
CCAGATCAGG TGATGGCAAT CAGACTAACA GCAGACAACC CAATGGGAGT CAGGATAGAG
CTGGATCGGG GCGAGAACTA TGAAAAAGTT GAGGCTAATG AAAATACGAT AACTCTTTCC
GGTTCTTGTG GTGGGAATGG TTCAAAATTT ATAGCGAAAG TCCAAGTAAT CAGCGACGGA
ACAATTGTTA GAGCAGGTGC TTTTCTGGAA GTAGAAAATG CTTCTGAGAT AGTGCTCTAT
GTAGCCGGAA GGACTGATTT TTACGAGGAA GACCCAATGG ATTGGTGTAA TGAAAAATTA
GCACTTGCCG CCCAAAAAGG TTATGAAGAA ATAAAGAAAG ATCATATAGC GGATTACGCA
TCCTTATATC AACGGGTTGA TTTAGACCTA AATGGCGATA AGAATTATTT GAATTTACCT
ACGGATGAAC GATTAAGGTT ATTTAAAGAA AATAAGTTAG ACGATGGCTT ATTAGAGCTC
TACTATAATT ATGGACGTTA TTTGTTGATT TCTTCCAGTC GGGAAGGTGC ATTGCCTGCA
AATCTTCAAG GAATATGGAA CAAGGATATG ATGCCGGCTT GGGGATCTAA ATATACGATT
AATATTAATA CACAAATGAA TTATTGGCCT GCTGAGGTAA CTAATTTAAG TGAGTGCCAT
ACACCTTTAT TTGAACATAT AAAGAGGATG GTGCCGCATG GAAGAGAAGT TGCTGAGAAA
ATGTATGGTT GCAGGGGGAT TGTAGCTCAT CATAATACTG ACATTTATGG TGACTGCGTA
CCGCAGGGGA AATGGATGCC AGCTACTATG TGGCCAATGG GGTTTGCATG GTTAGCGACT
CATGTGATCG AGCATTATAG GTATACCAAA GATGTAAGCT TTGTAAAAGA TTTTTATTCT
ATATTAAAGG ATGCATCCTT ATTTTACGTT GATTATTTGG TACGCGACAA AGAAAATCAA
TTGGTGACAT GTCCTTCGAC ATCTCCGGAG AATACGTATA TATTAGAAAA TGGTGAAAAA
AGTACTTTGT GTTATGGACC ATCCATGGAT AGTCAAATCA TTAAGGAATT ATGGACTGGT
TTCATTGAGG TTTCGAGTGA TTTAGAGGTA TCTAATGATG TTGTCTCAGC TGTTGAAAAT
ATGCTTAAGG AATTACCAAA AGCAAAAGTA GGCTCAAGGG GGCAGTTACT TGAATGGACA
AAAGAATATA AGGAATGGGA AGCAGGACAT CGTCATATAT CCCATTTATA TGGGTTATAT
CCAGGAAGTA CTATCACTTT TGAGAAGGAT AAAGAATTTT TTGAAGCTTC TAAGGTAACT
ATAAATGAAC GCTTGTCAGC AGGAGGTGGA CATACAGGCT GGTCACGAGG TTGGATTATA
AATATGTGGG CCAGATTACT TGATGGTGAG AAAGCGCTAT ATAATCTTCA GGAATTATTA
TGCCATTCAA CAGCACATAA TTTATTTGAT TTGCACCCTT CGAATACGAC TGGAATGTCC
TCAATTTTTC AGATTGACGG TAATTTCGGA GGAACTGCCG GCTTATCTGA AATGCTCTTA
CAAAGTCATG AAGATGTCAT CTGTTTACTT CCTGCATTAC CACAAAGATG GGAAAATGGA
TATGTGACCG GATTAAAGGT AAGAGGTAAT ATTGAAGTAA ATCTATGGTG GGAAAATGGA
AAATTAAATA GGGCAGAGTT TTTATCACCG ATTAATCAAA GGAAAAAGAT TAAGCTAAAC
GATAAGATAG TTATACTGGA TTTATGTGAA AATAAGATTG TCGATTATAT GAGCTAA
|
|---|
| Protein sequence | MSQNTFLFYD KPANADIWEE ALPLGNGSFG AMLYGNVEEE VIKLNQESVW YGGFRNRINP
DSRKVLPKVR ELIFDGQLKA AEELVYTSMF GTPISQGHYE PLADLRIAFN KRILHHSEQW
QERQINHSNY KRFLDLQTAC YNSSYTWRET DYKREALISY PDQVMAIRLT ADNPMGVRIE
LDRGENYEKV EANENTITLS GSCGGNGSKF IAKVQVISDG TIVRAGAFLE VENASEIVLY
VAGRTDFYEE DPMDWCNEKL ALAAQKGYEE IKKDHIADYA SLYQRVDLDL NGDKNYLNLP
TDERLRLFKE NKLDDGLLEL YYNYGRYLLI SSSREGALPA NLQGIWNKDM MPAWGSKYTI
NINTQMNYWP AEVTNLSECH TPLFEHIKRM VPHGREVAEK MYGCRGIVAH HNTDIYGDCV
PQGKWMPATM WPMGFAWLAT HVIEHYRYTK DVSFVKDFYS ILKDASLFYV DYLVRDKENQ
LVTCPSTSPE NTYILENGEK STLCYGPSMD SQIIKELWTG FIEVSSDLEV SNDVVSAVEN
MLKELPKAKV GSRGQLLEWT KEYKEWEAGH RHISHLYGLY PGSTITFEKD KEFFEASKVT
INERLSAGGG HTGWSRGWII NMWARLLDGE KALYNLQELL CHSTAHNLFD LHPSNTTGMS
SIFQIDGNFG GTAGLSEMLL QSHEDVICLL PALPQRWENG YVTGLKVRGN IEVNLWWENG
KLNRAEFLSP INQRKKIKLN DKIVILDLCE NKIVDYMS
|
|---|
| |