Gene Cphy_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1383 
Symbol 
ID5742333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1724327 
End bp1725226 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content32% 
IMG OID641292486 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_001558497 
Protein GI160879529 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAT TAATTGCTTT TTGCACCATA TTTGTGGTGG CTGTCATTTT TTCTATATGG 
GAATTTCGAA AAAAACATGT TCATAGCAAC AGTGCACATA AGCATCATCA TGGAATAAAA
CATAAGCATG GAGAAGGGTT TTCCATTGAC TTATATGCTT ATACATCTCA TATCAGAGAC
TGGAGTTCTG ATTTTAAAGT TACCTTTTCA GTCATAGTCA TGATTTTAAG TATTGTACTG
AACAATCCTT ATGTATCCGT TGTAATTATT TTTGCAATGG CTTATATCAC TGTGGTAAAA
GGTGGTTTGT CGATAACAGA ATATTTATCA TTTTTGGCGA TTCCATTATC TTTTATTTTG
CTTGGTACAT TTACGATTGC CATTGATTTT TCAAAAGAAC CAATAGGTCA ATATAATTTG
TATCTTGGCT TTTGTTATGT ATTTACTTCT TTAGTACAAC TAAAGAAAAT GTTGTTTTTA
ATACTTAAAG TTTTTGCAGC TGTAAGCGCT CTACAGATGA TGACATTATC TACTCCATCA
AGTGAAATCA TCGCTGTTTT AAGAAAAGTT CATATGCCAA AACTCATTCT TGAATTAATG
AACCTAATTT ACCGTTTTAT TTTTATTCTA GTTGATGTTT ATAGGCAGAT GAAAAACTCA
GCAGAAGCAC GTCAGGGTTA TTGTGATTTT AGGACCTCTT GTATTACTTT TGGGAGTATT
GCAAGTAATA TGCTTGTCGT TTCACTGAAA AAGGCAAATG CTTATTACAA TGCTATGGAA
GCCAGATGTT ACGATGGGGA ATTACATTTT TTGGAAGAAA AAAAAGCGAT AAAGTGGAAT
CAACTAATTG CAGCAACTGC ATTTATTATG TTTCTGTTTT TGCTCTGGGG AATCATGTGA
 
Protein sequence
MTKLIAFCTI FVVAVIFSIW EFRKKHVHSN SAHKHHHGIK HKHGEGFSID LYAYTSHIRD 
WSSDFKVTFS VIVMILSIVL NNPYVSVVII FAMAYITVVK GGLSITEYLS FLAIPLSFIL
LGTFTIAIDF SKEPIGQYNL YLGFCYVFTS LVQLKKMLFL ILKVFAAVSA LQMMTLSTPS
SEIIAVLRKV HMPKLILELM NLIYRFIFIL VDVYRQMKNS AEARQGYCDF RTSCITFGSI
ASNMLVVSLK KANAYYNAME ARCYDGELHF LEEKKAIKWN QLIAATAFIM FLFLLWGIM