Gene Cphy_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1373 
Symbol 
ID5742323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1713165 
End bp1714448 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content41% 
IMG OID641292476 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_001558487 
Protein GI160879519 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGAT CAGAAGAACT TTTTAAAGAA GCACTTAAGG TTATCCCAGG TGGAGTTAAT 
AGTCCGGTAA GGGCATTTGG TTCTGTCGGA GAAAGTCCAA GGTTTATTAA GAGGGCAGAG
GGTGCCCATT TGTATGACGT AGATGGTAAA GAATATATTG ATTATATCTG TTCCTGGGGA
CCAATGATTT TAGGACATAA TCATCCAGAT ATTTTAGAAA GTGTAGTACA AGCCTGTCAG
AATGGTTTAA GCTTCGGAGC TGTCACAGAG ATGGAAGTTA AGATGGCAAA GCTGATTTGC
GAGTTGGTTC CTTCGATTGA AATGGTTCGT ATGGTGAATT CAGGCACCGA GGCTGTTATG
AGTGCCATTC GTGTTGCAAG GGGCTATACC GGTAGAAACA AAATAATAAA ATTCAATGGG
TGCTATCATG GACATAGCGA CGGTCTGCTT GTAAAAGCGG GATCAGGTGT AATGACAGCG
GGAGTTCCGG ATAGTCTTGG CGTACCAAAA GGGTGTACGG AGGATACTCT TACTGCAAAT
TATAATGATA TTACCGGTGT TCAGGAATTA TTTAACCAAT ATAGGAGTGA TATTGCAGCA
GTAATTGTTG AACCAGTAGC TGCCAATATG GGAGTTGTTC TTCCGAAGGA AGGTTTTTTA
CACGGATTAA GAAAGCTATG TAATGAGAAT GGGACAGTAC TTATTTTCGA TGAGGTAATC
ACAGGTTTTC GTCTTGGGAT AGATGGTGCC CAGGGGTATT ATGGGGTAAC ACCGGATTTG
ACTACTTACG GAAAAATCAT AGGAGCAGGT ATGCCAGTTG GAGCCTATGG GGGGCGTAAA
GAAATCATGG AAGTCGTAGC ACCCCTTGGA GCCGTATACC AGGCAGGAAC CTTAAGCGGT
AATCCGGTTG CTATGACGGC GGGCTATACT CAGCTGACAA TTTTAAAAGA AAATCCAGAT
TATTATACAA AGCTAAATCA GATGGGTGAG CTGTTATTTG GTGATATTGA GATGAAATTC
AGACGTGCTG GAATTCCATT TCAAATGAAT CATGTCGGTT CTTTAGGAAG CTTGTTCTTT
GCCAAGGAGG AAGTGTATGA TTATCAATCT GCAAAGGCTT CTGATACAGA ACAATATAAA
GCATATTTTA AATATATGCT AAATAAGGGC ATTTATTTGG CACCTGCACA GTTTGAAGCT
ATGTTCTTAT CTGTGGCACA TGGAGAAGAA GAAATAAAAC AAACATTAGA TACAATGGAT
GGTTTTTTAG AGTCAGTAAG ATAA
 
Protein sequence
MTRSEELFKE ALKVIPGGVN SPVRAFGSVG ESPRFIKRAE GAHLYDVDGK EYIDYICSWG 
PMILGHNHPD ILESVVQACQ NGLSFGAVTE MEVKMAKLIC ELVPSIEMVR MVNSGTEAVM
SAIRVARGYT GRNKIIKFNG CYHGHSDGLL VKAGSGVMTA GVPDSLGVPK GCTEDTLTAN
YNDITGVQEL FNQYRSDIAA VIVEPVAANM GVVLPKEGFL HGLRKLCNEN GTVLIFDEVI
TGFRLGIDGA QGYYGVTPDL TTYGKIIGAG MPVGAYGGRK EIMEVVAPLG AVYQAGTLSG
NPVAMTAGYT QLTILKENPD YYTKLNQMGE LLFGDIEMKF RRAGIPFQMN HVGSLGSLFF
AKEEVYDYQS AKASDTEQYK AYFKYMLNKG IYLAPAQFEA MFLSVAHGEE EIKQTLDTMD
GFLESVR