| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1372 |
|---|
| Symbol | |
|---|
| ID | 5742322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1712170 |
|---|
| End bp | 1713165 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641292475 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_001558486 |
|---|
| Protein GI | 160879518 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTAA AAATGGATAT GATACAAAGA CCAAGAAGAC TAAGAAACAA TTCGATACTC
AGAAAAATGG TGAGAGAAAC CAGAATGGAT AAATCCTCCT TAGTATATCC TGTGTTTATT
AAAGGAGGAG TAGGAATTGA AGAAGAAATC AAATCTATGG AGGGACAGTT TCGCTACAGT
ATTGACCGTC TTCCATATAA GCTAGAGGAA TTAGCGAAAG CTGGCATTGA TAAAGTTTTA
TTGTTTGGAA TTCCGGAAGA AAAAGATGAA TGTGGAAGTT CTGCATTTGA TGATAATGGA
ATCATTCAGA AAGCACTTCG TTCCTTAAAA ATGCAATTTC CCGAGATGTA CTGTATCACT
GATGTATGCA TGTGTGAGTA TACCTCCCAT GGTCATTGTG GAATCTTAAA TGGCGATAAG
GTTGATAATG ACAAGACATT AGAGTATTTG GCGAAGATAG CATTATCTCA TGCAGAGGCT
GGAGCAGATA TGATTGCACC GTCTGATATG ATGGATGGCA GGATAGGGGC GATTAGAAGA
ATGTTAGATA GCAATCAATT AGAACATATT CCTATCATGT CCTATGCAGT AAAGTATGCA
TCAGCTTTTT ATGGACCATT CCGAGAAGCA GCAGGCTCAG CTCCTGCTTT TGGCGATCGC
AAAACCTATC AAATGGATTA TCACAATAAA AGAGAAGCAA TGAAAGAGGC ATTGCTTGAT
ATAGAAGAGG GTGCAGACAT TATTATGGTA AAGCCGGCAC TTTCTTATCA CGACGTAATC
AACGAGGTGT CCAATGCTGT ACAAGTTCCT GTTGCTGCGT ATAGTGTAAG TGGAGAATAC
GCAATGGTAA AAGCAGCTGC AAAGGCTGGA TTTATTAACG AAGCAGATGT TATATGCGAA
ATGGCAACAG GTGCATATCG AGCGGGTGCG AGTATCTATA TTACTTATTT TGCAAATGAA
CTGGCAAGAT ATATGGATGA AGGGAGAATT GGCTAA
|
|---|
| Protein sequence | MAVKMDMIQR PRRLRNNSIL RKMVRETRMD KSSLVYPVFI KGGVGIEEEI KSMEGQFRYS
IDRLPYKLEE LAKAGIDKVL LFGIPEEKDE CGSSAFDDNG IIQKALRSLK MQFPEMYCIT
DVCMCEYTSH GHCGILNGDK VDNDKTLEYL AKIALSHAEA GADMIAPSDM MDGRIGAIRR
MLDSNQLEHI PIMSYAVKYA SAFYGPFREA AGSAPAFGDR KTYQMDYHNK REAMKEALLD
IEEGADIIMV KPALSYHDVI NEVSNAVQVP VAAYSVSGEY AMVKAAAKAG FINEADVICE
MATGAYRAGA SIYITYFANE LARYMDEGRI G
|
|---|
| |