Gene Cphy_1364 details

Gene Information

• Locus tag: Cphy_1364
• ID: 5743751
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1703262
• End bp: 1703882
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641292467
• Product: TetR family transcriptional regulator
• Protein accession: YP_001558478
• Protein GI: 160879510
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA GTGGAAATGA TAACAGAAGT GTTCGGAATA CCAAGAAAAA ATTATTAACT 
GGATTATTAA GCCTCATGCA TCAGAAAGCA ATATCTGGTA TAACAGTACG TGAGTTAACG 
GAGCTTGTGG ATGTTAACCG AGGAACTTTT TATTTTCATT ATGCAGATAT ATATGACATG 
ATCAGTAAGG TGCAGGAGGA ATTCTTTCAA AAATTCAATG AAATCATTGA CCAGATGATA 
ATACAAACGC CGGTAAAGTG TAACCCTCCT GAAGTTCTTG TAAGTATTTT TTCTATCTGT 
GCCGAAAACC GGGAATTTTG CGAGATTATG CTGGGACCCA ACGGGGATGC TGCTTTTTTA 
GACCGTATTA CGAATATTGT GGATGAGAAA ATCTCAGACT TATGGAAAAG CGTAGGAGCA 
CATATGACTC CGGAGGAGTA TGAATACTTT AATGCCTTTC TTATCAACGG CTATATCGGA 
TTTCTTCAAA AGTGGTTGAT AACCGGTTGT AAGCAGTCAC CAGAGGAAAT GGCAGTATTT 
GCAGCTAATG TTCTTATTCC GACCATAAAG AACTCCCTTG AATTCAGTGG ATTAATGAAG 
AATTACAATC ATTTGAATTA A 

 

Protein sequence

MNKSGNDNRS VRNTKKKLLT GLLSLMHQKA ISGITVRELT ELVDVNRGTF YFHYADIYDM 
ISKVQEEFFQ KFNEIIDQMI IQTPVKCNPP EVLVSIFSIC AENREFCEIM LGPNGDAAFL 
DRITNIVDEK ISDLWKSVGA HMTPEEYEYF NAFLINGYIG FLQKWLITGC KQSPEEMAVF 
AANVLIPTIK NSLEFSGLMK NYNHLN