| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1352 |
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| Symbol | |
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| ID | 5743739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 1686019 |
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| End bp | 1688442 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641292456 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001558467 |
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| Protein GI | 160879499 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAT ACGATTCCCT AAACCCGGAA CAACGAAGAG CTGTGGAGCA CGATCGTGGT
CCAATGTTAA TTTTAGCCGG CGCTGGTTCT GGTAAAACAA GAGTGTTAAC CCATAGAATT
GCCTACCTGA TTGAAGAGAG AAATGTAAAT CCATATCAGA TAATGGCTCT AACCTTTACG
AACAAAGCAG CCAAAGAAAT GAGAGAACGT GTCGATAAGA TTGTGGGATA TGGCGCTGAA
AATATCTGGG TCAGTACTTT CCACTCCACC TGTGTTCGTA TCCTAAGACG TTTTATTGAA
ACCCTTGGAT ATGATCGAAA TTTTACAATC TATGATACAG ACGATCAAAA GACTTTAATA
CGTGAAGTTT TAAAATTCTT ACAAATTGAT ACAAAGCAGA CCAAAGAGAG AGTCTTTCTT
TCTGCTATTT CAAGTGCTAA GGATGAAGGA ATCTCCCCAG AAGAGTTTGA ACTATCTGCA
TTGGGTGATT ATAATAAAAT GAAGATTTCC AATGTTTATA AGGAATATCA AAGACGACTT
AAGACAAACA ATGCCCTTGA TTTTGATGAT TTAATTATGA AGACGGTTGA ACTCTTTCAA
TCTAATACAG AGGCATTAAA TTACTATCGT AATCGTTTTC GATACATTAT GGTGGATGAG
TATCAAGATA CCAATACCAT TCAGTTTAAA TTAATACGTT TACTTGCACA TAGCTTGAAT
GAATATAATG AAGTAGAACA TAACCTTTGC GTAGTAGGTG ATGACGATCA ATCCATTTAT
AAATTCCGTG GTGCTAATAT CCGAAACATC CTTGATTTTG AAAAGGAATT TCCAGATGCA
GTCGTAATTA AACTGGAACA AAATTATCGT TCTACAAAAA ATATTCTAAA TGCAGCCAAT
GAAGTAATTC ACAATAACCT TGGCCGTAAG GATAAGTCTT TGTGGACCGA TAATGAAGAT
GGTGAGCAAG TTAGTTTTTG CCAGTATGAT ACTGATTTTG CAGAAGCAAC TCAGGTAGTT
GATAGTATTA AAACATTAAA TGATCAAGAT GGTATATCTT TTAATAACTT TGCCATCCTA
TATAGAACAA ACGCTCAGTC TCGTGTATTC GAAGAGAAAA TGATTCAACG AAGCGTTCCT
TATAAAATCA TCGGTAGTAT TAATTTCTAC CAAAGAAAAG AAATCAAGGA CCTTCTAGCC
TACTTAAAAA CGATTGATAA CGGGCTTGAT GGTATTGCAG TAAAGCGTAT TATTAATGTT
CCTAAACGAG GGATTGGTTT AACTACACTT GACCGTGTGG AAGAATTCTC TGTGAAAAAT
AATATGAGTT TTTATGACGC TCTACGTCAT GCAGAAAATA TCCCTGGATT AGGCCGTTCC
ACCTCAAAAA TCACCTCATT TGTCAGTTTT ATAGAAACTA TAAAAAGTAA ACTAAGCTCT
GATACCTTTA CCTTAAAGGA TTTGATGGAA GAAATTTTAG AGGGCACTGG ATACTTAAAA
GAATTAGAAG AAGCTGATGA TGAGTCCGCG GAAGATCGTA TCGGAAATAT CAATGAACTA
ATTAATAAAA TCGTAACCTA TGAAGTGGAA GCAACCGAAC CTCCAACCCT CAGTGGTTTC
CTAGAAGAAG TAGCTTTGGT TGCTGATATT GACTCTCTTG AGGAAGATAG TAATCATGTA
GTATTAATGA CCCTTCATAG TGCAAAAGGA CTTGAGTTCC CTTATGTGTA TCTTTGTGGT
ATGGAGGATG GTATTTTCCC TAGTTATATG TCAATCAATG CAGAAAATCC AGAACTTGAA
ATCGAAGAAG AACGACGTCT TTGCTATGTA GGTATCACGA GAGCTATGAA GCAGATACAT
TTAAGTGCAG CTAGGCAGCG AATGATGCGA GGTGAAACTC AATTTAATCG ACCATCCAGA
TTTATTAACG AGATTCCCCG CTATCTTCTG ACGATTCAGT CCGCACAGAA TAAAGGATAT
CTTGCAAAAG ATTCCTATGG CGAAAGTCCA ATCCGTAATG CATCACCAAA CTTTTCAACT
CAGTCACGTG GTATGTTTGA TTCAGATAAT CCATTTGACA AATCATCAAG TTACAATGAT
ACCATGTTTG ATAAAGCTAC ACCTTCTATG CGTGGTACGA CTGGAATTAA TTCCATGCCA
TCATTTTCTG GTCAAGCAAA AACAGCGCGT GGTTTTCAAC CATCCGTTGG CGGTACATTA
CCAACCAAAA ATTTTGGTAA CAGTAATCTT GGCACCCTTG CCTATGGCGT TGGTGATACT
GTGAAACATA TTAAATTTGG ACAAGGCGTT GTTACTAATC TAACAAAAGG CGGTAGAGAT
TACGAAGTTA CTGTTGACTT TGGCGAACAA GGTATCAAAA AAATGCTATC CTCTTTCGCT
AAATTGGAAA AAATTGAAGA TTAA
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| Protein sequence | MSIYDSLNPE QRRAVEHDRG PMLILAGAGS GKTRVLTHRI AYLIEERNVN PYQIMALTFT
NKAAKEMRER VDKIVGYGAE NIWVSTFHST CVRILRRFIE TLGYDRNFTI YDTDDQKTLI
REVLKFLQID TKQTKERVFL SAISSAKDEG ISPEEFELSA LGDYNKMKIS NVYKEYQRRL
KTNNALDFDD LIMKTVELFQ SNTEALNYYR NRFRYIMVDE YQDTNTIQFK LIRLLAHSLN
EYNEVEHNLC VVGDDDQSIY KFRGANIRNI LDFEKEFPDA VVIKLEQNYR STKNILNAAN
EVIHNNLGRK DKSLWTDNED GEQVSFCQYD TDFAEATQVV DSIKTLNDQD GISFNNFAIL
YRTNAQSRVF EEKMIQRSVP YKIIGSINFY QRKEIKDLLA YLKTIDNGLD GIAVKRIINV
PKRGIGLTTL DRVEEFSVKN NMSFYDALRH AENIPGLGRS TSKITSFVSF IETIKSKLSS
DTFTLKDLME EILEGTGYLK ELEEADDESA EDRIGNINEL INKIVTYEVE ATEPPTLSGF
LEEVALVADI DSLEEDSNHV VLMTLHSAKG LEFPYVYLCG MEDGIFPSYM SINAENPELE
IEEERRLCYV GITRAMKQIH LSAARQRMMR GETQFNRPSR FINEIPRYLL TIQSAQNKGY
LAKDSYGESP IRNASPNFST QSRGMFDSDN PFDKSSSYND TMFDKATPSM RGTTGINSMP
SFSGQAKTAR GFQPSVGGTL PTKNFGNSNL GTLAYGVGDT VKHIKFGQGV VTNLTKGGRD
YEVTVDFGEQ GIKKMLSSFA KLEKIED
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