Gene Cphy_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1343 
Symbol 
ID5743730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1675739 
End bp1676941 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content37% 
IMG OID641292448 
Productputative RNA methylase 
Protein accessionYP_001558459 
Protein GI160879491 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.417493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG CTATCGTAAC GTTAAAAAAA GGGGAAGGAA GATTTTTAAA ATCAGGTGGC 
CTATGGATAT TTGATAATGA AATCAGTCAG GTTAGTGGTG AATTTAATAA TGGAGATTTA
GTAACTGTTC AAGATTTTGA TGGTTATTGC ATGGGAACTG GATTTATTAA TGAATTATCG
AAGATTAGAG TTCGCATGAT GAGTAGAGTA AAAGGTCAAG AGATTACAGA AGAATTTCTT
AAAGATCGAT TACTTGCAGC ATGGGAATAT CGCAAGAAGA CAGTCGATAC CAGCAGTTGT
CGTATCGTAT TTGGAGAGGC TGATTTTCTA CCTGGTTTAG TTATTGATAA ATTCTCAGAC
GTTTTGGTAG TTCAATCCTT AGCGCTTGGG ATTGATCGTA TGAAGGATGT GATTGTACGA
TTATTAAAAG AGATACTGCT AGAAGATGGA GTTATCATTC GTGGTGTATA TGAACGAAGC
GATGCGAAAG TAAGAACCCA GGAAGGCATG GAGCGTATCA AAGGTTTTCT TGGAGAACCT
TTTGACACGA ATGTCTTGAT AACGGAAAAT GGAGTAAAGT ATTACGTAGA TGTTGAGGAT
GGTCAAAAGA CTGGATTTTT CCTAGATCAA AAATATAATC GATTAGCAAT CCAACGTATA
TGTAAAGACG CGAAAGTATT AGATTGTTTT ACTCATACCG GTTCGTTTGC TTTAAATGCT
GGAATTGGTG GAGCAAAAGA AGTACTTGGT ATTGATGCCT CCGAATTAGG CGTAAATCAG
GCAAGGAAGA ATGCTGAGTT AAATGGGCTG GAAAAGATAG TTCGTTTCCA ATGTGAGGAT
GTCTTTGAGT TACTACCTCG TTTAGAGGAG TCAGGTGAGA AGTTTGATGT TATTATTCTT
GATCCACCTG CATTTACAAA GTCAAGAAAT TCAGTAAAGA ATGCCATTAA GGGATATCGT
GAAATAAATC TAAGAGCTAT GAAATTAATC AAAGATGGCG GTTACCTTGC AACTTGTTCT
TGCTCACACT TTATGACACC TGATTTATTT ACAGAGACAA TTGGACAGGC TGCTAGAAAT
GTGCATAAGC GTTTACGTCA GGTGGAATAT CGTACTCAGT CACCAGATCA TCCTATCCTT
TGGGCAGCAG ACGAATCTTA CTATTTAAAA TTTTATATTT TCCAAGTATG TGATGAAAAA
TAA
 
Protein sequence
MEKAIVTLKK GEGRFLKSGG LWIFDNEISQ VSGEFNNGDL VTVQDFDGYC MGTGFINELS 
KIRVRMMSRV KGQEITEEFL KDRLLAAWEY RKKTVDTSSC RIVFGEADFL PGLVIDKFSD
VLVVQSLALG IDRMKDVIVR LLKEILLEDG VIIRGVYERS DAKVRTQEGM ERIKGFLGEP
FDTNVLITEN GVKYYVDVED GQKTGFFLDQ KYNRLAIQRI CKDAKVLDCF THTGSFALNA
GIGGAKEVLG IDASELGVNQ ARKNAELNGL EKIVRFQCED VFELLPRLEE SGEKFDVIIL
DPPAFTKSRN SVKNAIKGYR EINLRAMKLI KDGGYLATCS CSHFMTPDLF TETIGQAARN
VHKRLRQVEY RTQSPDHPIL WAADESYYLK FYIFQVCDEK