Gene Cphy_1333 details

Gene Information

• Locus tag: Cphy_1333
• Symbol: ruvA
• ID: 5743720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1664452
• End bp: 1665063
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641292438
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001558449
• Protein GI: 160879481
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000329731
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGCAT TTATACAAGG CGAATTAGCT GAGGTTAAAG AAAATTATGT TGTCGTAGAC 
AACAATGGGA TGGGGTATGA GATTTTTATA CCACATACAG TCCATTCTTA TTTGCCTGCG 
ATTGGAGATA AAGTAAAATT TCATACGTAT CTTCAGGTAA GGGAAGATGG CATGGCGTTA 
TTTGGCTTCT TAAATCGTGA AGATTTAGCG ATGTTTAAAT TGTTGATTAC AGTAAATGGA 
ATTGGTCCAA AAGGTGCAAT AGGTATCTTA TCAGCAATAT CAACCGATGA TTTACGTTTT 
GCTGTGTTAG CAGAAGATGT GAAGGCAATT TCTAAAGCTC CAGGGATTGG AACAAAAACT 
GCAAGTAAGT TAATTTTAGA ATTAAAGGAC AAGTTCAAGT TAGAGGATGC TTTTGAAGCT 
ACTTTCCAGT CGAATCAGGT GATATCTACT GGAGGAAAGG GCAATAATGA TGGAATTCGA 
GAAGAAGCCA TCCAAGCATT GGTAGCCCTT GGATATTCTG CAACGGACGC TCTTAAGGCT 
GTTAAGGCAG TAGAAATTAC ATCAAATATG ACGTCAGAGG ATGTGCTTAA GTTTAGTTTG 
CGCAATTTTT AA 

 

Protein sequence

MLAFIQGELA EVKENYVVVD NNGMGYEIFI PHTVHSYLPA IGDKVKFHTY LQVREDGMAL 
FGFLNREDLA MFKLLITVNG IGPKGAIGIL SAISTDDLRF AVLAEDVKAI SKAPGIGTKT 
ASKLILELKD KFKLEDAFEA TFQSNQVIST GGKGNNDGIR EEAIQALVAL GYSATDALKA 
VKAVEITSNM TSEDVLKFSL RNF