| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1316 |
|---|
| Symbol | |
|---|
| ID | 5744922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1647155 |
|---|
| End bp | 1648360 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641292421 |
|---|
| Product | electron transfer flavoprotein alpha subunit |
|---|
| Protein accession | YP_001558432 |
|---|
| Protein GI | 160879464 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2025] Electron transfer flavoprotein, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC TTATTATTAA TCAAAGTAAA ATTGATAATA TAAAAGAATT TATAAATATC
TGTCCTTTTG GTGCATTAGA AGAAGCAGAG GGAGAAGTCA GAGTAAATGC TGCCTGTAAG
ATGTGTAAAT TGTGTGTGAA AAAAGGACCG GAAGGTGCTG CAACTTATGT GGAAGAGACT
GTAGAAGCAA TTGATAAATC TTTATGGAAA GGTATCGCTA TTTATGTGGA ACATATCGAT
GGGGAACATA TCGATGGGGA CATTCATCCT GTTACCTATG AATTAATCGG TAAAGCAAAA
GAACTCGCTA AAAAGATTCA TCATCCTGTA TATGCCATTA TGATGGGAAG TAATATAAAA
GATAAATGTG AGGAACTTCT TCATTATGGC ATTGATAAAA TATTTGTATA TGACATAAAT
GAGTTAGACC GTTTTAAGAT AGAACCATAT ACGGCAGTTT TTAAAGATTT TATAGAAAAT
ATAAAACCAA CTGCTATCTT AGTAGGTGCA ACTACCGTGG GACGCCAGTT AGCACCTCGC
GTTGCGGCAA GACTTCGAAC CGGATTAACA GCAGATTGTA CTATACTGGA TATGAATGAG
GATACTGACC TGATACAAAT TCGCCCTGCT TTTGGCGGTA ACATTATGGC ACAGATTCTA
ACTCCTAATC ATAGACCTCA GATGGCAACG GTACGTTATA AAGTTATGGA TGCCCCAAAG
AGAGAAAAAG AGAAATCCGG TGAAATACTT TTTTGTAACA TAGATTCCAA ACTCTTAAAA
ACCAATGTGG AAGTATTGGA TATCATCAAG AAAGAAAAAG AACAATTTAT CGAAGGAGCC
GATGTACTGG TAGTAGCAGG CCGTGGTGTG AAAAAGGAAG AAGATATTGC AATGCTTGCG
GAACTTGCAG ATTTATTAGG TGGCCAGCTT GCTTGTACCA GGCCAATGGC AGAATCCGGA
TGGATGGAAG CAAAACGACA AATCGGATTA AGCGGAAGAA CAGTAAGACC AAAACTTATT
ATCACCTGTG GTGTGTCTGG TGCCATTCAG TTTGTGGCAG GTATGGATCA CAGCGAACAT
ATTATAGCTA TTAATAAAGA TGAGAAAGCA CCAATCTTTA AAGTAGCAAA TGATTGTTTG
GTTGGAGATT TATATGAAAT CATACCGGAC TTAATTGAGA AATTAAAGGC AAGTAAGGGG
GCTTAA
|
|---|
| Protein sequence | MAKLIINQSK IDNIKEFINI CPFGALEEAE GEVRVNAACK MCKLCVKKGP EGAATYVEET
VEAIDKSLWK GIAIYVEHID GEHIDGDIHP VTYELIGKAK ELAKKIHHPV YAIMMGSNIK
DKCEELLHYG IDKIFVYDIN ELDRFKIEPY TAVFKDFIEN IKPTAILVGA TTVGRQLAPR
VAARLRTGLT ADCTILDMNE DTDLIQIRPA FGGNIMAQIL TPNHRPQMAT VRYKVMDAPK
REKEKSGEIL FCNIDSKLLK TNVEVLDIIK KEKEQFIEGA DVLVVAGRGV KKEEDIAMLA
ELADLLGGQL ACTRPMAESG WMEAKRQIGL SGRTVRPKLI ITCGVSGAIQ FVAGMDHSEH
IIAINKDEKA PIFKVANDCL VGDLYEIIPD LIEKLKASKG A
|
|---|
| |