Gene Cphy_1313 details

Gene Information

• Locus tag: Cphy_1313
• ID: 5744919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1643820
• End bp: 1644518
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641292418
• Product: regulatory protein GntR HTH
• Protein accession: YP_001558429
• Protein GI: 160879461
• COG category: [K] Transcription
• COG ID: [COG2186] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAA AAGAGCTACA GAAAAAGTCC TATTCCAAAG TGATAGATTA TATTAAACAT 
CAGATTATGG CTGGTCAGCT AAGAATAGGT GATAAACTTC CTGCGGAGAG AGAATTATCG 
GAAGCGCTGG GAGTCAGTCG TAACTCAGTA CGTGAAGCTG TCCGTACGTT AGATATTATG 
GGGGTTATAT CCAGCCAGCA TGGAGCCGGT AATTATGTCC AAGGAAACTT TGAGAATAAT 
TTAGTAGAAT CCATGTCCAT GATGTTCTTA CTAAACCAGA TTAATTATGA ACAGATCAGC 
CAACTAAGAC TTGGACTGGA AATGCAGGCT TTAATGTTAT CTATAGACAA CATCACAGAA 
CCTGAGTTAA AACAAATGGA ACAGATTATA TCCCAACTGG AGAACGTAAC GGAAGAAAAC 
AATGTGATTC TGGATAAAAA ACTGCATTAC AGTATTGCTG TGGCATCGGG GAATGTATTA 
ATTCTTAACA TATTACAAGC TTTGTCCACC ATAGTAGATC AGTTTATTGT GGACTTAAGA 
AGAGAAATAT TAAGTAGTGA AGACAGCAAG GCTGGCTTAT GTGAAGCCCA TAAGGGAATG 
GTTAGGAGCC TACTGACAAA AGACAAAGAA CTGGGCAGAA AATCAGTATA TAAGCACTTT 
GCATTAATTG ATGATAAGTT AAAGAATTTT GATAAGTAA 

 

Protein sequence

MEEKELQKKS YSKVIDYIKH QIMAGQLRIG DKLPAERELS EALGVSRNSV REAVRTLDIM 
GVISSQHGAG NYVQGNFENN LVESMSMMFL LNQINYEQIS QLRLGLEMQA LMLSIDNITE 
PELKQMEQII SQLENVTEEN NVILDKKLHY SIAVASGNVL ILNILQALST IVDQFIVDLR 
REILSSEDSK AGLCEAHKGM VRSLLTKDKE LGRKSVYKHF ALIDDKLKNF DK