| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1302 |
|---|
| Symbol | |
|---|
| ID | 5744908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1629279 |
|---|
| End bp | 1630811 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641292407 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_001558418 |
|---|
| Protein GI | 160879450 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1041] Predicted DNA modification methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGAG CAACCTTTCA AAATATAGTA GAGAACAGGG ATGTTAGAAA AAATCTGATT
CTTTTAAAGG AGATGCTTCG TGAAGATGGA AAAAATGATA GTCATAATAG AGAAGCTTTG
CTTTATGTGA TTGCTGGAAA ATATGAGGTA TTTCGTGGCT TATTGCAGGA TGAAGATGCA
AAGGTTAGAA AAAATACAGC ATTAATTATG GGGGAATTGG CAGTTCCAGA ATTTGCAGAG
ATTCTTTATG AAGCTTATAA TAACGAGACA CAACGATTTG TGAAAAGCTC GTATTTATCT
GCTTTAATGA ACATGGACTA TAATGAACTT CTTCCAAAGC TTCGGACAAA CTATGAGGCT
GTGAAAAGTA TTCCATTAAC GGACGAGAAT AAAAAACATC TGAGTGAGGA GCTTCGATTA
CTGGAGGAGC TTTTGGTTCA ATCAGAAGGA GAAAAAAAGC ACACCTTTGT TGGTTATGAT
AAGGTAAATG AAATGGTTTT ACTGTGCAAT CGAAACCATA TTTATGTGAC CATGGAACAA
CTTGGGAAGA TACCCAAGAA GGAATTTACA GCTGGGGTAA TGGTAAAGAC AAAAGAATTA
AGAGAAGTTC TTAAAATACG GACTTACCGA GAGTTACTAT TTGCAGTTGA TGGAGTTCGA
ACAGTACCAA ATGATGTTAC GGAAGCAGCT GGAGTTTTGA CAGATGGTAG CTTATATCAA
TTTTTAGAAG AACGTCACAA AGGAGAAGGA CCTTTCTATT TCCGTCTCGA GATAAAAGGA
AAGATGGATT TAGAGAAGCG CACTACCTTT GTTAAAAAAC TTAGCGTTGA GATAGAGTAT
TTGAGTGAGC GTAAGCTTCT TAATTCCGTA AATCATTATG AGGTCGAGAT TCGCCTTATT
GAAAATAAAG AAGGCAAATT TAATGTATTA TTGCGCCTTT ATACGTTACC AGATGAGCGC
TTTATATACC GTAAAGAAGT GATTGGTACC AGTATCCACC CAGCAAATGC AGCACTAACT
GCGCAACTTG TGAAACCATA CCTTATAGAA GATGCGCAAG TACTTGATCC ATTTTGCGGA
GTTGGAACAA TGTTAATCGA ACGTGATTTA TGCGTGCGTG CAAAAACAAT GTATGGTCTT
GATATCTATG GTGAAGCTAT AGAGAAGGCG CGTATTAATA CGGAGCTTGT AAACCGATGT
GGGCTTAAAA ATGAAGATGG CGGACATCTC GTGATTAATT ATATTAATCG AGATTTCTTT
GATTTCAGGC ATGATTATTT GTTTGACGAA ATCTTTACCA ATATGCCTAC CGTAGGACGA
AGCATGGACG AAGGTGAATT ACTCAACTTG TACCAGAAGT TTTTTAGGAG AGCTCATGAA
CTTTTAGAGG ATCAGGGGAT AATTGTGTTA TATTCACATA ACCGTGATTA TGTAAGAAAA
TTTGCAAGTA CAAAGCCTTA TCGCATTGAG AAAGAGTTTG AGATTTCTAT GATGGAGAAG
ACTTATGTAT ATGTAATTAG AGTTAGTAGA TAG
|
|---|
| Protein sequence | MLRATFQNIV ENRDVRKNLI LLKEMLREDG KNDSHNREAL LYVIAGKYEV FRGLLQDEDA
KVRKNTALIM GELAVPEFAE ILYEAYNNET QRFVKSSYLS ALMNMDYNEL LPKLRTNYEA
VKSIPLTDEN KKHLSEELRL LEELLVQSEG EKKHTFVGYD KVNEMVLLCN RNHIYVTMEQ
LGKIPKKEFT AGVMVKTKEL REVLKIRTYR ELLFAVDGVR TVPNDVTEAA GVLTDGSLYQ
FLEERHKGEG PFYFRLEIKG KMDLEKRTTF VKKLSVEIEY LSERKLLNSV NHYEVEIRLI
ENKEGKFNVL LRLYTLPDER FIYRKEVIGT SIHPANAALT AQLVKPYLIE DAQVLDPFCG
VGTMLIERDL CVRAKTMYGL DIYGEAIEKA RINTELVNRC GLKNEDGGHL VINYINRDFF
DFRHDYLFDE IFTNMPTVGR SMDEGELLNL YQKFFRRAHE LLEDQGIIVL YSHNRDYVRK
FASTKPYRIE KEFEISMMEK TYVYVIRVSR
|
|---|
| |