Gene Cphy_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1283 
Symbol 
ID5744889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1611686 
End bp1612924 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content36% 
IMG OID641292389 
Producthypothetical protein 
Protein accessionYP_001558400 
Protein GI160879432 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000225003 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTA TAAAACCGTT TTATTGTGTT AGGCCAGAGA AAGAATATGC AAGTCGTGTG 
GCAGCTTTAC CATATGATGT CTATAACAGA GTGGAAGCGA AAGAGGCTGC CCTAAAAGAT
GAATTATCTT TTTTAAATAT AGACCGTCCG GAGACTGGAT TTGAGGATTC CGTAGATATG
TATGATGAAA GGGTTTACCA AAGAGCAAAA GATTTGTTAA TAAAACGAAT CAAAGATGGA
ACTTATCTTG AGGATGAGAA AAAGTATTAT TACATATATG AGCTGATAAT GAAGGGGCGT
TCGCAAACAG GTATTGTCGC TTGTGCTTCT ATTGATGACT ATCAGAATAA TATAATTATG
AAGCATGAAA ATACAAGAGA AGACAAGGAG CAGGATAGAA TTCGTCATGT AGATACCTGT
AGTGCTCAAA CTGGTCCGAT TTTTTTAGCA TACCGATCGA ATGAAGTAAT TCATAATGTT
GTGGAGCGTG TAAAAAAAGG AGAAGCGCTA TACTCTTTTA GTACAGAGGA TGGGATATCA
CATAATGTTT GGAAAATAGA AGAGGAACTT TCTATAGAAA CTATTGAAAA AGCTTTCGGT
GGAATTGATA GAATTTATAT TGCGGATGGA CATCATCGAG CAGCGTCTGC GGCTAAGGTA
GGTTTAAAAA GAAGAAAAGA AGCCAAGGAA TATGATGGTA GCGAGGAGTT TAATACATTT
CTTTCTGTAT TATTTCCGGA GGATCAGCTT ATGATTATGC CTTATAACAG GGTAGTTGCT
AATTTGAATG GCCTTAGTAA AGATGAGTTT CTAAATGCTG TTCGTGAGAA TTTTTATGTC
AAGAATATGG AAGAAGTTAG AGTGTCTCCG GAGAAAAAAG GTACATTTGG TATGTATCTT
CATCATACTT GGTATGAATT GATTGCAAAA GAGACATTAT TACAGATAGA AGACCCAGTC
GATGCGTTAG ATGTGTCATT ATTACAAGAT TATATATTAA ATCCGATTTT AGGGATCAAG
GATCCTAGAA CAGATCACAG AATTGATTTT ATTGGTGGTA TTCGTGGTCT TGGCGAGCTA
GAAAAACGTG CTACGGAGGA TATGACTGTT GCATTTTCCA TGTATCCAAC CTCTATTCAG
GAATTGTTTG CTGTATCAGA TGTAGGTAAA TTAATGCCTC CGAAATCTAC ATGGTTTGAA
CCAAAATTAA GAAGCGGTTT GTTTATACAT CGAATTTAA
 
Protein sequence
MAIIKPFYCV RPEKEYASRV AALPYDVYNR VEAKEAALKD ELSFLNIDRP ETGFEDSVDM 
YDERVYQRAK DLLIKRIKDG TYLEDEKKYY YIYELIMKGR SQTGIVACAS IDDYQNNIIM
KHENTREDKE QDRIRHVDTC SAQTGPIFLA YRSNEVIHNV VERVKKGEAL YSFSTEDGIS
HNVWKIEEEL SIETIEKAFG GIDRIYIADG HHRAASAAKV GLKRRKEAKE YDGSEEFNTF
LSVLFPEDQL MIMPYNRVVA NLNGLSKDEF LNAVRENFYV KNMEEVRVSP EKKGTFGMYL
HHTWYELIAK ETLLQIEDPV DALDVSLLQD YILNPILGIK DPRTDHRIDF IGGIRGLGEL
EKRATEDMTV AFSMYPTSIQ ELFAVSDVGK LMPPKSTWFE PKLRSGLFIH RI