| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1279 |
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| Symbol | |
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| ID | 5744885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1609133 |
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| End bp | 1609510 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641292385 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001558396 |
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| Protein GI | 160879428 |
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| COG category | [K] Transcription |
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| COG ID | [COG1725] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00230471 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGTTTA ATAATAATAT GCCTATTTAT ATGCAAGTAA TTCATGAGTT AAAGAAAGAG
TTAATTCGTG GTAATCTAGC ACTTGGTAGT AAAATGCCTT CCGCTAGGGA TTTAGCAATT
CAATATCAAA TTAATCCAAA CACTGCGAAT CGTATTTACC GAGAGATGGA ACTTCAAGAG
CTCTGCTACA CAAAGCGAGG TCTAGGAACC TTTGCAACAG AGGATGAGCA AAGACTTATG
CGGGTAAGGG AAGAGATGGC CAAGGAGTAT ATGAGTGCAT TTCTTATAGG CATGAGAGAT
TTGGGTTTAC AAGAAGAGGA TGTGATTTCT CTCATTAAAA AAGAGTTTGA CAATACAAAG
GAGCAGGGTT TAAGTTAA
|
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| Protein sequence | MEFNNNMPIY MQVIHELKKE LIRGNLALGS KMPSARDLAI QYQINPNTAN RIYREMELQE
LCYTKRGLGT FATEDEQRLM RVREEMAKEY MSAFLIGMRD LGLQEEDVIS LIKKEFDNTK
EQGLS
|
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