Gene Cphy_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1275 
Symbol 
ID5744881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1604941 
End bp1606257 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content32% 
IMG OID641292381 
Producthypothetical protein 
Protein accessionYP_001558392 
Protein GI160879424 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00110439 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAC TGTTATCTAA ACTAGTCATT TATCGTAATA TCGGAAAAGA CAGTATACTG 
GTACGTTTAG CAGATATTAT AGAACAGTAT CAGCGAGGAA ATTTAAATAA AGAAGATACG
ATTGCATCTA TCTATACACA GATACATAAT TTACTTGATA TCGCAACGGA ATATGGTTTT
AATGATAACT TATGGCATAA TTATTTGAGT TATTTACTTG CCTCTGTTGA GAATCCTTTT
AGTATGTCTT GTGAGAAAAT AGGGGCAAGA GAAGGTACTG TAAATAAGTT TGCTAAAGGG
GACTTTGCAA TATTTAAAGC ATTATTTGAT TATGACTTTA CTCCATTAGA GGATGAGCTT
GGCATTGATT GCTTTAACGT TATTACAGAC TATAAAGCAA TTGAGAAAAA TGGAAAGTGC
TACAATCGTA GTGTTAGTGA AAAAGTTCAA GTATTAAGTC GTAAGATTTC AGAAGCAAAG
GATGAACATG AAATCTTCCA GATTGTAACG GATTTTTATA AATATTATGG TGTTGGGATG
CTTGGGTTAA ACAAAGCTTT TCGTATAGGG AAAGACAGTG ATGAGTTCCG ATTATCACCG
ATTACGAATA CGGAAGAAGT AGTGTTGTCT GATTTGATAG GTTATGAGAT TCAAAAGAAA
AAATTAGTTG ATAACACAAA AGCATTTATC GGAGGGAAAA AGGCAAACAA TGTTCTATTG
TTTGGAGATA GTGGGACAGG AAAGTCAACT AGTGTTAAGG CTATTCTTAA CGAATACTAC
CCAGAAGGAC TTCGTATGAT TGAAATCTTT AAGCACCAGT TTAAAGATTT ATCAACAGTG
ATCTCAAAAA TTAAGAATCG AAATTATAAA TTTATTATTT ATATGGATGA TTTGTCATTT
GAGGAATTTG AAATAGAATA TAAGTATTTA AAAGCAGTGA TTGAAGGTGG GCTTGAAACA
AAACCTGATA ATGTTTTAAT CTATGCGACC TCAAACCGTA GACATCTTAT TAGAGAAACA
TGGAGTGATC GTTCTGATAT GTCAAAAGAC GAGTTACATC GTTCTGATAC GATGCAAGAA
AAACTCTCTT TAGTTGCTAG GTTTGGTATC AGCATCAATT ATTCTGCTCC ATCTCAAAAA
GAGTATTTTA TAATTGTTGA AGAGTTAGCG AAAAAATATA ATAACTTTGG TTTATCAAAA
GAAGATTTAA TCCAAAAAGC AAATATGTGG GAGCTTAGTC ATGGAGGTTT ATCTGGTAGA
ACAGCCTCCC AGTTTATCAC TTATATGCTA AGTCAAGAGC ATAACTACGA AGATTAG
 
Protein sequence
MYKLLSKLVI YRNIGKDSIL VRLADIIEQY QRGNLNKEDT IASIYTQIHN LLDIATEYGF 
NDNLWHNYLS YLLASVENPF SMSCEKIGAR EGTVNKFAKG DFAIFKALFD YDFTPLEDEL
GIDCFNVITD YKAIEKNGKC YNRSVSEKVQ VLSRKISEAK DEHEIFQIVT DFYKYYGVGM
LGLNKAFRIG KDSDEFRLSP ITNTEEVVLS DLIGYEIQKK KLVDNTKAFI GGKKANNVLL
FGDSGTGKST SVKAILNEYY PEGLRMIEIF KHQFKDLSTV ISKIKNRNYK FIIYMDDLSF
EEFEIEYKYL KAVIEGGLET KPDNVLIYAT SNRRHLIRET WSDRSDMSKD ELHRSDTMQE
KLSLVARFGI SINYSAPSQK EYFIIVEELA KKYNNFGLSK EDLIQKANMW ELSHGGLSGR
TASQFITYML SQEHNYED