| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1270 |
|---|
| Symbol | |
|---|
| ID | 5744876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1600203 |
|---|
| End bp | 1600520 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641292376 |
|---|
| Product | PadR-like family transcriptional regulator |
|---|
| Protein accession | YP_001558387 |
|---|
| Protein GI | 160879419 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000169455 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTTA ATACAGGATC CGCACTGTTG GACGCAATTG TGCTGGCTGC GGTTTCTAAG
GAACCGGAAG GAACTTATGG ATATAAAATA ACACAGGATG TAAGGGAAGC AATTGAAATT
TCGGAATCTA CGCTATACCC GGTACTTCGT AGATTACAAA AAGATGATTG TTTAGAAGTG
TATGATATGG AAATTGCGGG AAGAAATCGA AGGTATTATA AAGTAACACC ACAAGGACGG
ATACAGCTTC AGCTGTATTG CTCAGAGTGG AAAAACTATT CCGCAAAGAT TAGTAAAATT
TTTGAGGGGG TGGCGTAG
|
|---|
| Protein sequence | MVFNTGSALL DAIVLAAVSK EPEGTYGYKI TQDVREAIEI SESTLYPVLR RLQKDDCLEV
YDMEIAGRNR RYYKVTPQGR IQLQLYCSEW KNYSAKISKI FEGVA
|
|---|
| |