Gene Cphy_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1262 
Symbol 
ID5744868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1592405 
End bp1593403 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content40% 
IMG OID641292368 
Productdihydroxyacetone kinase subunit DhaK 
Protein accessionYP_001558379 
Protein GI160879411 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02363] dihydroxyacetone kinase, DhaK subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTAA ATATGAAAAA GATTATTAAT GAACCAACGA AGGTTGTGTC AGAACTTCTC 
AAAGGCATGG AGCTAGCACA TCCTGAGTTA GTTTATACAG AAAAACTAGA AGTAATTGCA
AGAAGAGAAA AGTGCAACAA AGTTGCAGTA ATATCAGGTG GTGGTGCAGG ACATGAGCCG
GCTCATGCAG GATATGTAGG AAAAGGTATG TTAGATGCTG CTATCTCTGG TAATGTATTT
TCCTCGCCAA GTCCAGACAG GATTATAGAA GGTATTAAGC AGACAGATGC AGGTAAAGGC
GTTTTGATGG TAATCAAGAA TTATTCTGGT GATATTATGA ACTTCGGACT TGCTAAGGAT
TTGGCAGAGC TTGAGGACAT CGAGGTAGAA AGTGTTGTTG TAAGAGATGA TGTCGCTGTT
CCGGACAGTA CTTATTCCAC AGGACGCAGA GGTATAGCAG GGACTGTATT TGTTCATAAG
ATTGCAGGAG CAAAAGCGGA GAGTGGCGCT GATTTGCAGG AAGTAAAAGC AGCTGCTGAG
AAAGCAATCG CAAATATCAG GAGTATGGGA ATGGCAATGA CTCCTTGTAT CTTGCCAGCA
GTAGGAAAGC CTGGATTTGT ACTTGAAGAA AATGAAATAG AAATCGGTAT GGGAATTCAC
GGAGAACCAG GTGTGGAGCG TACAACTGTA AAGACTGCAA AGGAAGTAGC GAAGATTTTA
TTAGATAAGA TTTTAGTGGA TTATGACTTC TCTAACAGCG AAGTGGCTTT ATTAGTAAAT
GGTCTTGGCG GCACACCACT TATGGAGTTA TATATTCTCA ATAAAGAAGT ACAAGAATTA
TTAGCAGAAC AGAATATCAA GGTATATAAG ACATTGGTTG GGAACTACAT GACAGCACTT
GATATGAGCG GATGTTCTAT CACTTTAATG AAACTAGATG ATGAGCTTAA GGAATTACTG
GATGCACCTT GTAATACTCC TGGTCTTACG ATTAATTAA
 
Protein sequence
MEVNMKKIIN EPTKVVSELL KGMELAHPEL VYTEKLEVIA RREKCNKVAV ISGGGAGHEP 
AHAGYVGKGM LDAAISGNVF SSPSPDRIIE GIKQTDAGKG VLMVIKNYSG DIMNFGLAKD
LAELEDIEVE SVVVRDDVAV PDSTYSTGRR GIAGTVFVHK IAGAKAESGA DLQEVKAAAE
KAIANIRSMG MAMTPCILPA VGKPGFVLEE NEIEIGMGIH GEPGVERTTV KTAKEVAKIL
LDKILVDYDF SNSEVALLVN GLGGTPLMEL YILNKEVQEL LAEQNIKVYK TLVGNYMTAL
DMSGCSITLM KLDDELKELL DAPCNTPGLT IN