Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1260 |
Symbol | |
ID | 5744866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1590919 |
End bp | 1591689 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641292366 |
Product | ABC transporter related |
Protein accession | YP_001558377 |
Protein GI | 160879409 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTATT TACAAGTGAA TGGCATTACA AAGAGATTTG GAGGTATTGT CGCCGTTGAT AAGGTCAGCT TTGAAGTTAA CGAAGGAGAA ATTGTTAGTA TTATCGGACC AAATGGTGCT GGAAAAACAA CAATATTCAA TATGTTAACT GGTGTCTATA CCATAGATGA GGGTGAGATT ATATTCGATG GCTGCGCAAT CCATAATCAT AAACCTCAGG AAGTTGTGAA AGCTGGTATT TCGAGAACTT TCCAAAACAT CCGCTTATTC CAGGACCTTC GAGTAGTTGA GAATGTATTA GTTGGCACTC ACATTAAGAC AAAATATAGT TTTCTTGATT CTGTGTTACG TACGAGAAGA TTTCGTGGAG AGGAAGATGA GAAAGTACTG ACTGCAATTC GAATTCTTAA GTCCATAGGG CTAGATGATC GCAGGGATGA TTATGCGCAG AATCTTCCTT ACGGAGACCA AAGAAAATTA GAAATCGCAA GAGCAATAGC AACTGGAGCG AAGGTACTTT TGTTAGACGA ACCGGCAGCA GGTATGAATC CACAAGAATC TGCGGAACTT CTTCAGTTTA TCAGAAGCTT GCAAAAACAG GGTTATACCA TTATTTTAAT TGAGCATGAT ATGAGCGTAG TTATGAATAT ATCGGACCGT ATTTATGTTA TTGACCACGG AAAACCAATT GCACATGGTT TACCAAAGGA AATTGCTAAT AATGAAAAGG TAATTGAAGC TTACTTAGGA GGTGTTAGTA CCGGTGCTTA A
|
Protein sequence | MAYLQVNGIT KRFGGIVAVD KVSFEVNEGE IVSIIGPNGA GKTTIFNMLT GVYTIDEGEI IFDGCAIHNH KPQEVVKAGI SRTFQNIRLF QDLRVVENVL VGTHIKTKYS FLDSVLRTRR FRGEEDEKVL TAIRILKSIG LDDRRDDYAQ NLPYGDQRKL EIARAIATGA KVLLLDEPAA GMNPQESAEL LQFIRSLQKQ GYTIILIEHD MSVVMNISDR IYVIDHGKPI AHGLPKEIAN NEKVIEAYLG GVSTGA
|
| |