Gene Cphy_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1260 
Symbol 
ID5744866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1590919 
End bp1591689 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content39% 
IMG OID641292366 
ProductABC transporter related 
Protein accessionYP_001558377 
Protein GI160879409 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTATT TACAAGTGAA TGGCATTACA AAGAGATTTG GAGGTATTGT CGCCGTTGAT 
AAGGTCAGCT TTGAAGTTAA CGAAGGAGAA ATTGTTAGTA TTATCGGACC AAATGGTGCT
GGAAAAACAA CAATATTCAA TATGTTAACT GGTGTCTATA CCATAGATGA GGGTGAGATT
ATATTCGATG GCTGCGCAAT CCATAATCAT AAACCTCAGG AAGTTGTGAA AGCTGGTATT
TCGAGAACTT TCCAAAACAT CCGCTTATTC CAGGACCTTC GAGTAGTTGA GAATGTATTA
GTTGGCACTC ACATTAAGAC AAAATATAGT TTTCTTGATT CTGTGTTACG TACGAGAAGA
TTTCGTGGAG AGGAAGATGA GAAAGTACTG ACTGCAATTC GAATTCTTAA GTCCATAGGG
CTAGATGATC GCAGGGATGA TTATGCGCAG AATCTTCCTT ACGGAGACCA AAGAAAATTA
GAAATCGCAA GAGCAATAGC AACTGGAGCG AAGGTACTTT TGTTAGACGA ACCGGCAGCA
GGTATGAATC CACAAGAATC TGCGGAACTT CTTCAGTTTA TCAGAAGCTT GCAAAAACAG
GGTTATACCA TTATTTTAAT TGAGCATGAT ATGAGCGTAG TTATGAATAT ATCGGACCGT
ATTTATGTTA TTGACCACGG AAAACCAATT GCACATGGTT TACCAAAGGA AATTGCTAAT
AATGAAAAGG TAATTGAAGC TTACTTAGGA GGTGTTAGTA CCGGTGCTTA A
 
Protein sequence
MAYLQVNGIT KRFGGIVAVD KVSFEVNEGE IVSIIGPNGA GKTTIFNMLT GVYTIDEGEI 
IFDGCAIHNH KPQEVVKAGI SRTFQNIRLF QDLRVVENVL VGTHIKTKYS FLDSVLRTRR
FRGEEDEKVL TAIRILKSIG LDDRRDDYAQ NLPYGDQRKL EIARAIATGA KVLLLDEPAA
GMNPQESAEL LQFIRSLQKQ GYTIILIEHD MSVVMNISDR IYVIDHGKPI AHGLPKEIAN
NEKVIEAYLG GVSTGA