| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1257 |
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| Symbol | |
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| ID | 5744863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1587695 |
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| End bp | 1588855 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641292363 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001558374 |
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| Protein GI | 160879406 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000744493 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAT TAAAAAGAGT ATTTGGGTTG ATTTCATTAG TGGCTATTGT AGTTTCAAGT
ATGACGGGGT GTGGAAACAA AGGAAAAACA ACATCGGGGG ATAGTTCTAG TGCAGAAACC
ATCAAAATAG CTGTAGCAGG ACCAATGACT GGCGATAATG CAGAATATGG TATAGGATTT
ACCAATGCAG CAAAGATGAT GGCAGATGAA TGGAATAAAA AAGGCGGAGT ATTAGGAAAA
CAGATTAAAA TCGTACAGTA CGATGATAAA AATTCCTCAG AAGAAGCAGC AACCATTGCT
CAAAAGATCG TCAGTGAGGG TGATATTGCA GGTGTTATCG GACATTTCTC TTCTGGTGTA
TGTTTAACAG CAGCACCAAT TTATCAAGAG AATAAATTGG TTGAGATCTC TCCTTCCGCA
TCTCATCCAG ACTATAGTTT AGTGGGTGAT TACATATTTA GAAATAATAC GGTTATCAGC
GCCGAGGCAG CAGCAAGTAT TGATATCGCA GTGAATGACC TTGGAAAGAA GAAAATTGGT
ATTATTTCTA TTAAGACAGA CTGGGGAACA AACACGTCAA AGATTATCAA AGAGTTAGTT
GAAAAACTTG GTATAGATGG TGTTTCTATC GTAGCACATG AAGAAGTAGT AGAAGGGTCT
GATGACTATA GCCCAGCAAT CACAAAATTA AATCAGGCAG GAGCCGATGT AGTAATCTGC
GCTGGTATGT ACAATCTTGT AGCTCCTGTT GCAAAGCAAT ATAAGCAGAT TAATCCTGAT
ATTAAGGTAG TTGGTTTCTC TAATTCATAT AGCCAACAAT TAATCGAACT TGGCGGCTTA
GCAATAGAAG GTGTATGTTT CCCAGTTATC TTCTTCTCTG AATCTAAGGA TGAAAAGATA
AAAAACTATG TTAGTGCTTT TGAAAAAGAA TTTGGTAACA AACCAAGTGC TTTAACTTCA
CAAGCTTATG ACTCCGTTGG TATGTTATTA TCTGCAATTG AAAAAGCAGG TTCCACAGAT
AAAGAAGCTG TTCGAAATGC ATTAGCAGAG GTAGATTATG AAGGTGTAAC AGGTCAGACG
AAGTTTGATG AAAATGGTAA TGTAAATAAG CAATTTGTTA AAGTAACAAT TCAAGGTGGA
AAATTTGTAA AGATGAACTA G
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| Protein sequence | MRKLKRVFGL ISLVAIVVSS MTGCGNKGKT TSGDSSSAET IKIAVAGPMT GDNAEYGIGF
TNAAKMMADE WNKKGGVLGK QIKIVQYDDK NSSEEAATIA QKIVSEGDIA GVIGHFSSGV
CLTAAPIYQE NKLVEISPSA SHPDYSLVGD YIFRNNTVIS AEAAASIDIA VNDLGKKKIG
IISIKTDWGT NTSKIIKELV EKLGIDGVSI VAHEEVVEGS DDYSPAITKL NQAGADVVIC
AGMYNLVAPV AKQYKQINPD IKVVGFSNSY SQQLIELGGL AIEGVCFPVI FFSESKDEKI
KNYVSAFEKE FGNKPSALTS QAYDSVGMLL SAIEKAGSTD KEAVRNALAE VDYEGVTGQT
KFDENGNVNK QFVKVTIQGG KFVKMN
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