Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1241 |
Symbol | |
ID | 5744847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1566938 |
End bp | 1567600 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641292347 |
Product | two component transcriptional regulator |
Protein accession | YP_001558358 |
Protein GI | 160879390 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCACA TTTTAGTGGT TGAAGATGAT GAAAAACTAC GAAATGGATT GGTATTATCC TTATCGTCAA ACAATCAAGA AGTCAAAGCA GCCCCCTCTA TTAAATCGGC GAAAGAATTA CTTAAGATAC ATAAGTTTGA TTTATTAATA TTAGATTGTA ATTTGCCAGA TGGTAACGGA ATTGAATTTT GTAGAGAAAT AAGCGGAGCA ACAGAGATTC CTATCATATT TTTAACTGTC AATGATACTG AAATTGATAT TGTATCAGCA TTTCGTGTGG GAGCAACGGA TTATGTAACG AAACCATTCT CTATTATGGT ATTAAGGGAA AGAGTTAAAG CAGCATTAAG GCGAAATAAA TGTAGAGATG ATATATATAA AGATGATTAT TACTATTTTA ATTTTACTGC TTTGGAATAT AAGATAGAAG GGGTAGAAGT TATATTAAGT GTTGTAGAGC AGAAAATAAT AAAACTATTG GTCTGTAATA AAAATAAGAT TATACCAAGG GAAAGACTAA TAGATTTGGT ATGGTCCTGT AATGAAGAAT TTATTGATGA TAATGCACTT ACTATGGCTA TCAAAAGGTT ACGTTTTAAA ATCGGAAATG AAGCTATAAA AACGGTATAT GGATTAGGAT ATATGTGGGT TGGGAAAATT TAA
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Protein sequence | MNHILVVEDD EKLRNGLVLS LSSNNQEVKA APSIKSAKEL LKIHKFDLLI LDCNLPDGNG IEFCREISGA TEIPIIFLTV NDTEIDIVSA FRVGATDYVT KPFSIMVLRE RVKAALRRNK CRDDIYKDDY YYFNFTALEY KIEGVEVILS VVEQKIIKLL VCNKNKIIPR ERLIDLVWSC NEEFIDDNAL TMAIKRLRFK IGNEAIKTVY GLGYMWVGKI
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