Gene Cphy_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1232 
Symbol 
ID5744837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1555390 
End bp1556349 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content38% 
IMG OID641292337 
ProductL-lactate dehydrogenase 
Protein accessionYP_001558349 
Protein GI160879381 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01771] L-lactate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAC CAAGAAAAGT CATTATTATC GGAGCAGGTC ACGTAGGATC TCATGCTGGA 
TATGCACTGG CAGAGCAGGG GCTTGCAGAA GAAATTATCT TTATTGATAT TGATAGAGAA
AAAGCGAAAG CACAAGCACT GGATATCTAC GATGCTACAG TATACCTACC ACACAGAGTT
AAGGTAAAAT CGGGTGATTA TAGTGATGCA GCTGATGCAG ATCTCATGGT GATTGCAGTA
GGAACCAATC CAGATAAAAA TAAGGGTGAA ACAAGAATGA GTACCCTTAC GAATACTGCT
CTAATTATTA AAGAGGTAGC TTGGCATATC AAAAATTCAG GTTTTGATGG TATGATTGTT
AGCATTTCAA ATCCAGCAGA TGTAATAACA CATTATTTAC AGCATTTACT TCAGTACTCA
TCCAATAAAA TTATTTCAAC AAGTACGGTA CTAGACTCTG CCAGACTTAG AAGAGCAATT
GCAGATGCTG TTGAAATTGA TCAAAAATCA ATCTATGGAT TTGTTCTTGG AGAACACGGA
GAAAGCCAGA TGGTTGCATG GTCAACGGTA TCTATAGCTG GAAAACCAAT TTTGGAACTA
ATCAAGGAAA AACCTGAAAA ATATGGGCAG ATTGATCTTT CTAAGCTTTC TGATGAAGCT
AGAGCAGGGG GATGGCATAT CCTAACTGGA AAAGGCTCAA CGGAATTTGG TATTGGTGCA
TCACTAGCTG AGGTTACACG AGCCATTTTC TCAGATGAGA AGAAGGTATT ACCAGTATCT
ACTCTCTTAA ATGGTGAGTA TGGCCAGCAT GATGTCTATG CATCTGTTCC TACGGTACTT
GGAATTCATG GTGTAGAAGA AATCATTGAG CTAAATTTGA CACCTGAAGA AAAGGGAAAA
TTCGATGCTT CTTGTAGAAC AATGAAAGAA AATTTTCAGT ATGCATTGAC GCTATCATAA
 
Protein sequence
MAKPRKVIII GAGHVGSHAG YALAEQGLAE EIIFIDIDRE KAKAQALDIY DATVYLPHRV 
KVKSGDYSDA ADADLMVIAV GTNPDKNKGE TRMSTLTNTA LIIKEVAWHI KNSGFDGMIV
SISNPADVIT HYLQHLLQYS SNKIISTSTV LDSARLRRAI ADAVEIDQKS IYGFVLGEHG
ESQMVAWSTV SIAGKPILEL IKEKPEKYGQ IDLSKLSDEA RAGGWHILTG KGSTEFGIGA
SLAEVTRAIF SDEKKVLPVS TLLNGEYGQH DVYASVPTVL GIHGVEEIIE LNLTPEEKGK
FDASCRTMKE NFQYALTLS