Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1232 |
Symbol | |
ID | 5744837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1555390 |
End bp | 1556349 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641292337 |
Product | L-lactate dehydrogenase |
Protein accession | YP_001558349 |
Protein GI | 160879381 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAC CAAGAAAAGT CATTATTATC GGAGCAGGTC ACGTAGGATC TCATGCTGGA TATGCACTGG CAGAGCAGGG GCTTGCAGAA GAAATTATCT TTATTGATAT TGATAGAGAA AAAGCGAAAG CACAAGCACT GGATATCTAC GATGCTACAG TATACCTACC ACACAGAGTT AAGGTAAAAT CGGGTGATTA TAGTGATGCA GCTGATGCAG ATCTCATGGT GATTGCAGTA GGAACCAATC CAGATAAAAA TAAGGGTGAA ACAAGAATGA GTACCCTTAC GAATACTGCT CTAATTATTA AAGAGGTAGC TTGGCATATC AAAAATTCAG GTTTTGATGG TATGATTGTT AGCATTTCAA ATCCAGCAGA TGTAATAACA CATTATTTAC AGCATTTACT TCAGTACTCA TCCAATAAAA TTATTTCAAC AAGTACGGTA CTAGACTCTG CCAGACTTAG AAGAGCAATT GCAGATGCTG TTGAAATTGA TCAAAAATCA ATCTATGGAT TTGTTCTTGG AGAACACGGA GAAAGCCAGA TGGTTGCATG GTCAACGGTA TCTATAGCTG GAAAACCAAT TTTGGAACTA ATCAAGGAAA AACCTGAAAA ATATGGGCAG ATTGATCTTT CTAAGCTTTC TGATGAAGCT AGAGCAGGGG GATGGCATAT CCTAACTGGA AAAGGCTCAA CGGAATTTGG TATTGGTGCA TCACTAGCTG AGGTTACACG AGCCATTTTC TCAGATGAGA AGAAGGTATT ACCAGTATCT ACTCTCTTAA ATGGTGAGTA TGGCCAGCAT GATGTCTATG CATCTGTTCC TACGGTACTT GGAATTCATG GTGTAGAAGA AATCATTGAG CTAAATTTGA CACCTGAAGA AAAGGGAAAA TTCGATGCTT CTTGTAGAAC AATGAAAGAA AATTTTCAGT ATGCATTGAC GCTATCATAA
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Protein sequence | MAKPRKVIII GAGHVGSHAG YALAEQGLAE EIIFIDIDRE KAKAQALDIY DATVYLPHRV KVKSGDYSDA ADADLMVIAV GTNPDKNKGE TRMSTLTNTA LIIKEVAWHI KNSGFDGMIV SISNPADVIT HYLQHLLQYS SNKIISTSTV LDSARLRRAI ADAVEIDQKS IYGFVLGEHG ESQMVAWSTV SIAGKPILEL IKEKPEKYGQ IDLSKLSDEA RAGGWHILTG KGSTEFGIGA SLAEVTRAIF SDEKKVLPVS TLLNGEYGQH DVYASVPTVL GIHGVEEIIE LNLTPEEKGK FDASCRTMKE NFQYALTLS
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